PanOCT:泛基因组Ortholog聚类工具-开源
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2021-04-28
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panoct_v3.23.tar.gz （93个子文件） 
panoct_v3.23 bin 
gene_order.pl 77KB paralog_matchtable.pl 7KB panoct.pl 169KB
README_panoct.txt 29KB example_dir example_blast.txt 21.51MB panoct_v3.23_output_dir fGI.att 553KB 25_core_adjacency_matrix.txt 524KB 90_pairwise_BSR_distance_matrix.txt 193B 0_noncore_adjacency_vector.txt 0B 90_pairwise_BSR_distance_matrix_phylip.txt 162B matchtable_paralog.txt 63KB Core.att 205KB 50_core_adjacency_distance_matrix_phylip.txt 162B 100_core_adjacency_matrix.txt 212KB fGI_report.txt.index 40KB 0_pairwise_BSR_matrix.txt 193B Jaccard_pairwise_cluster_similarity_matrix.txt 193B Sorenson_pairwise_cluster_similarity_matrix.txt 193B Core.attfGI 202KB micro.txt 246KB 100_core_adjacency_distance_matrix.txt 193B fGI_report.txt.details 0B id.txt 240KB 75_noncore_adjacency_vector.txt 111KB 100_noncore_adjacency_vector.txt 148KB BSR.txt 301KB 90_pairwise_BSR_matrix.txt 193B 75_core_adjacency_vector.txt 152KB pairwise_in_cluster.txt 1.57MB fGI_report.txt 0B 75_noncore_adjacency_matrix.txt 217KB pairwise_out_cluster.txt 420KB paralogs.txt 3KB Jaccard_pairwise_cluster_distance_matrix_phylip.txt 162B pairwise_identity_matrix.txt 193B 50_core_adjacency_vector.txt 182KB frameshifts.txt 10KB matchtable_id.txt 278KB paralog_weights.txt 364KB Sorenson_pairwise_cluster_distance_matrix.txt 193B 75_core_adjacency_distance_matrix_phylip.txt 162B pairwise_BSR_distance_matrix.txt 193B 25_core_adjacency_distance_matrix_phylip.txt 162B centroids.fasta 1.89MB 25_noncore_adjacency_matrix.txt 0B report.txt 329B histograms.txt 83KB 0_core_adjacency_distance_matrix.txt 193B 100_pairwise_identity_matrix.txt 193B 50_core_adjacency_matrix.txt 337KB 75_core_adjacency_matrix.txt 288KB 100_pairwise_BSR_distance_matrix.txt 193B 90_pairwise_identity_matrix.txt 193B parameters.txt 1KB 100_pairwise_BSR_distance_matrix_phylip.txt 162B 0_noncore_adjacency_matrix.txt 0B 0_core_adjacency_distance_matrix_phylip.txt 162B missing_blast_results.txt 74B matchtable_0_1.txt 70KB 100_noncore_adjacency_matrix.txt 289KB 0_core_adjacency_matrix.txt 524KB fragments_fusions.txt 12KB hits.txt 599KB 75_core_adjacency_distance_matrix.txt 193B 100_core_adjacency_distance_matrix_phylip.txt 162B gene_order.txt 628KB 50_noncore_adjacency_matrix.txt 174KB cluster_weights.txt 206KB 0_pairwise_BSR_distance_matrix.txt 193B pairwise_BSR_matrix.txt 193B 25_core_adjacency_vector.txt 288KB below_cutoff_clusters.txt 8KB partial_paralogs.txt 5KB 25_noncore_adjacency_vector.txt 0B 100_pairwise_BSR_matrix.txt 193B 50_core_adjacency_distance_matrix.txt 193B 100_core_adjacency_vector.txt 109KB 50_noncore_adjacency_vector.txt 89KB Jaccard_pairwise_cluster_distance_matrix.txt 193B 0_pairwise_identity_matrix.txt 193B 25_core_adjacency_distance_matrix.txt 193B 100_core_adjacency_breaks.txt 907B 0_core_adjacency_vector.txt 288KB 0_pairwise_BSR_distance_matrix_phylip.txt 162B pairwise_BSR_distance_matrix_phylip.txt 162B matchtable.txt 273KB Sorenson_pairwise_cluster_distance_matrix_phylip.txt 162B pairwise_cutoffs_matrix.txt 193B 100_core_adjacency_breaks_vector.txt 3KB example_tags.txt 28B example.gene_att 1.01MB example.pep 4.51MB LICENSE.txt 31KB资源评论
