matlab如何敲代码-TCGA_RNASeq_Clinical:TCGA_RNASeq_Clinical
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2021-05-23
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TCGA_RNASeq_Clinical-master.zip （92个子文件） 
TCGA_RNASeq_Clinical-master 
.gitignore 342B
TCGA_CancerType_Abbreviations.txt 1KB Analysis 
TCGA_24_manuscript_analysis.html 6.12MB TCGA_24_manuscript_analysis.Rmd 47KB LICENSE 1KB TCGA_CancerType_Publishable.txt 114B README.md 6KB Scripts process_tcga_rsubread 815B normalize_tcga_rsubread 2KB LUSC_LUAD_discordant_analysis 2KB summarize_tcga_rsubread 1KB process_tcga_level_3 6KB Codes TransposeData.py 291B Split.py 524B numZero.R 795B biological_rep.R 18KB CalcAccuracy.R 345B utilities.py 21KB CombineScalarValues.py 291B BuildMatrixFile.py 940B ProcessRnaSeqFeatureCounts.R 2KB IdentifyInconsistentPredictions.R 860B IdentifyDiscordantPredictions.R 698B CalcAUC.R 1KB PrintMatrixDimensions.py 281B Classify_luad_vs_lusc.R 3KB ParseSampleTypes.py 158B LUSC_vs_LUAD.R 6KB PeekMatrix.py 299B ProcessClinicalData.R 2KB PlotDiscordant.R 2KB ParseCgHubQueryResults.py 2KB FileContainsText.py 176B GetFileExtension.py 94B Analysis_datasets 5_01_predictions_raw rsem signature.cdt 49KB signature_s.cdt 42KB
signature.png 40KB predictions.png 175KB REPORT.html 3KB tpmlog_no signature.cdt 49KB signature_s.cdt 42KB signature.png 41KB predictions.png 167KB REPORT.html 3KB fpkmlog_no signature.cdt 49KB signature_s.cdt 42KB signature.png 41KB predictions.png 82KB REPORT.html 3KB rsem_no signature.cdt 49KB signature_s.cdt 42KB signature.png 40KB predictions.png 175KB REPORT.html 3KB GFP18_HER2_TCGA_Pipeline_Expected_Gene_Counts.txt 2.2MB TCGA20_clinical_data_ordered_all_clinical_variables_samples_as_columns.txt 13.49MB PANCAN12_19583_by_3380_numZeroes.txt 119KB rsubread_10_14.txt 52KB GFP18_HER2_Rsubread_TPM.txt 5.05MB .RData 2.99MB Rsem_10_14.txt 45KB .Rhistory 33KB GFP18_HER2_Rsubread_FPKM.txt 5.1MB PANCAN20_19583_by_3380_numZeroes.txt 119KB Classification_20_LUAD_LUSC_Predictions.txt 27KB Classification_12_LUAD_LUSC_Predictions.txt 28KB GFP18_HER2_Rsubread_geneCounts.txt 1.36MB 10_14_predictions_raw RSEM_q_log_200_f model.txt 3KB parameters.txt 277B probabilities.txt 120KB signature.cdt 55KB signature_s.cdt 49KB signature.png 46KB predictions.png 125KB REPORT.html 3KB TPM_q_log_200_f model.txt 3KB parameters.txt 277B probabilities.txt 110KB signature.cdt 55KB signature_s.cdt 44KB signature.png 51KB predictions.png 133KB REPORT.html 3KB fpkm_q_log_200_f model.txt 3KB parameters.txt 277B probabilities.txt 110KB signature.cdt 55KB signature_s.cdt 44KB signature.png 51KB predictions.png 126KB REPORT.html 3KB GFP18_HER2_TCGA_Pipeline_Normalized_Genes_Results.txt 2.91MB资源评论
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