# MatBots
MatBots are primitive AIs, 'assistants' if you will,
that use minimalistic GUI dialogs to guide the user through a
data processing pipeline in Matlab.
Isn't that an 'app'?
Bots are much more restrictive than apps.
Users are, to a greater extent than in an app,
guided through the correct steps to perform a task.
A bot usually performs a much more limited task than an app.
When possible, bots have a 'headless' mode,
which allows them to execute a processing pipeline as a typical
Matlab function, either on an image or a folder of images.
Each directory (except 'docs' and 'Tools') contains a bot for the task
suggested by the directory's name. For more details, see ReadMe.txt inside.
The directory 'Tools' contains stand-alone tools that may be used by different
bots (though each bot's folder is self-contained).
Note: different bots sometimes use functions with the same name but slightly
different implementations. For that reason, to avoid errors use the bot from inside
that bot's directory. For example, call nucleiSegmentationBot from the folder
NucleiSegmentationBot, spotsInNucleiBot from SpotsInNucleiBot, and so on.
Also, do not add a bot's folder to the Matlab path, because that might make
functions of the current folder lose higher priority status.
For references and video tutorials, see https://hms-idac.github.io/MatBots/
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MatBots-master.rar_feature extract_image processing_matlab_visua
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watershed segmentation image processing
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MatBots-master.rar_feature extract_image processing_matlab_visua (138个子文件)
index.html 5KB
volumeAnnotationToolPro.m 30KB
volumeAnnotationToolPro.m 30KB
volumeAnnotationTool.m 24KB
volumeAnnotationTool.m 24KB
volumeCropTool.m 16KB
mlSegmentationBot.m 15KB
mlSegmentationBot.m 14KB
thresholdSegmentationTool.m 14KB
thresholdSegmentationBot.m 14KB
spotMeasureTool.m 13KB
spotDetectionBot.m 13KB
advSpotDetectionBot.m 13KB
volumeViewTool.m 12KB
imageAnnotationTool.m 12KB
siameseThresholdSegmentationTool.m 12KB
imageAnnotationBot.m 10KB
imageAnnotationBot.m 10KB
padarrayXT.m 9KB
padarrayXT.m 9KB
padarrayXT.m 9KB
padarrayXT.m 9KB
mlrfsTrain.m 9KB
mlrfsTrain.m 8KB
lineScanTool.m 7KB
spotsInNucleiBot.m 7KB
imageAnnotationApp.m 6KB
bwPropsFilterTool.m 6KB
spotMeasureBot.m 6KB
bwPropsFilterBot.m 6KB
bwPropsFilterBot.m 6KB
advPointSourceDetection.m 6KB
spotMeasureTool.m 6KB
nucleiSegmentationBot.m 5KB
fmgaussfit.m 5KB
fmgaussfit.m 5KB
verticalRegistrationTool.m 4KB
stackViewTool.m 4KB
pixelClassificationBot.m 4KB
stackViewBot.m 4KB
pcbStartupDialog.m 4KB
bwMorphTool.m 4KB
bwMorphBot.m 4KB
bwMorphBot.m 4KB
locmax2d.m 3KB
setParametersDialog.m 3KB
spotsInNucleiHeadlessBot.m 3KB
thresholdSegmentationHeadlessBot.m 2KB
siameseThresholdSegmentationBot.m 2KB
siameseThresholdSegmentationHeadlessBot.m 2KB
smorlet.m 2KB
smorlet.m 2KB
smorlet.m 2KB
pointSourceScoring.m 2KB
circcentlikl.m 2KB
circcentlikl.m 2KB
circcentlikl.m 2KB
spbTokensDialog.m 2KB
pcbStartupDialog.m 2KB
thresholdSegmentationBot.m 2KB
spbNChannelsDialog.m 2KB
stackPackBot.m 2KB
parseLabelFolder.m 1KB
spbGetFolderDialog.m 1KB
snbNucleiChannelDialog.m 1KB
snbStartupDialog.m 1KB
parseLabelFolder.m 1KB
pcbModelDialog.m 1KB
pcbModelDialog.m 1KB
multipleChoiceDialog.m 1KB
multipleChoiceDialog.m 1KB
probMapContextFeatures.m 1KB
probMapContextFeatures.m 1KB
probMapContextFeatures.m 1KB
circlikl.m 1KB
circlikl.m 1KB
circlikl.m 1KB
volumeAnnotationBot.m 952B
filterGauss2D.m 924B
filterGauss2D.m 924B
filterGauss2D.m 924B
imageAnnotationBot.m 921B
filterGauss2D.m 896B
logPointSourceDetection.m 871B
classifyImagesInFolder.m 870B
mlrfsPixelClassify.m 840B
mlrfsPixelClassify.m 840B
mlrfsPixelClassify.m 840B
derivatives.m 803B
derivatives.m 803B
derivatives.m 803B
evalFit.m 719B
evalFit.m 719B
rffeatandlab.m 665B
rffeatandlab.m 665B
classifyImagesInFolder.m 651B
stackRead.m 487B
volumeWrite.m 461B
edgelikl.m 401B
edgelikl.m 401B
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