CellReg：跨会话注册单元
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2021-02-15
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CellReg-master.zip （74个子文件） 
CellReg-master Docs 
User Manual.docx 191KB CellReg 
cluster_cells.m 18KB initial_registration_spatial_correlations.m 8KB display_progress_bar.m 2KB compute_centroid_distances_model.m 6KB normalize_spatial_footprints.m 1KB compute_scores.m 4KB compute_spatial_correlations_model.m 6KB initial_registration_centroid_distances.m 6KB plot_estimated_registration_accuracy.m 10KB plot_RGB_overlay.m 2KB transform_distance_to_similarity.m 368B load_multiple_sessions.m 896B compute_centroids_projections.m 2KB plot_x_y_displacements.m 3KB compute_p_same.m 3KB plot_all_sessions_projections.m 2KB demo.m 23KB save_log_file.m 6KB align_images.m 28KB plot_single_session_projections.m 622B compute_centroid_locations.m 4KB freezeColors.m 9KB rotate_image_interp.m 1023B rotate_cell.m 1KB plot_all_registered_projections.m 5KB estimate_registration_accuracy.m 5KB choose_best_model.m 2KB evaluate_data_quality.m 4KB load_single_session.m 479B check_if_in_overlapping_FOV.m 824B estimate_number_of_bins.m 1KB compute_footprints_projections.m 2KB translate_spatial_footprint.m 1KB plot_initial_registration.m 3KB rotate_spatial_footprint.m 2KB plot_cell_scores.m 6KB gaussfit.m 3KB plot_models.m 8KB interpolate_pixel_value.m 1KB estimate_beta_mixture_params.m 1KB translate_projections.m 743B compute_data_distribution.m 10KB adjust_FOV_size.m 3KB plot_alignment_results.m 14KB GUI CellReg.fig 185KB plot_p_same_centroid_distance_slider.m 2KB plot_estimated_accuracy_GUI.m 5KB CellReg.m 106KB plot_x_y_displacements_GUI.m 1KB plot_p_same_spatial_correlation_slider.m 2KB
CellReg_Logo.png 26KB .gitignore 1KB CellReg_setup.m 168B SampleData spatial_footprints_01.mat 1.73MB spatial_footprints_05.mat 1.44MB spatial_footprints_02.mat 1.58MB spatial_footprints_04.mat 1.77MB spatial_footprints_03.mat 1.6MB SampleResults 
logFile_20170815_150847.txt 1KB Figures Stage 2 - abnormalities test - general.png 98KB Stage 2 - abnormalities test - Correlations.png 54KB Stage 3 - (x,y) displacements.png 59KB Stage 1 - spatial footprints projections.png 244KB Stage 4 - projcetions - initial registration.png 336KB Stage 5 - Registered pairs P_same.png 29KB Stage 3 - registration certainty.png 104KB Stage 5 - projcetions - final registration.png 333KB Stage 5 - cell scores.png 65KB Stage 2 - pre vs post alignment.png 518KB Stage 3 - model.png 123KB Stage 4 - same versus different cells.png 37KB README.md 3KB LICENSE.txt 18KB资源评论
