TreehopperSeq：实用程序脚本，数据分析管道以及带有非模型生物的RNA-Seq的文档的集合
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2021-02-17
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TreehopperSeq-master.zip （50个子文件） 
TreehopperSeq-master 
SummarisePolyALogs.sh 833B goTrimmomatic_polyA_pipelined.sh 2KB
unnamed-chunk-4-1.png 10KB goBowtie2_Filter.sh 2KB unnamed-chunk-3-1.png 13KB SummariseTrimLogs.sh 836B
ECEF_GoTerm_Extended.txt 8.47MB read_processing_2020 goTrimmomatic_polyA_pipelined.sh 3KB goBowtie2_Filter.sh 2KB srun_Trinity_pipelined.sh 2KB goTrimmomatic_paired_pipelined.sh 3KB 2020_library_basenames.txt 5KB 2020_library_information.txt 14KB bowtie2_func.sh 4KB TPM_normalization_scaling.md 7KB MLSeq_SpeciesSignal_tuneLength100.md 9KB LICENSE 1KB HeatmapProduction ECEF.genes.counts.matrix.collapsed.wing.isos.txt 2.84MB HV102.genes.counts.matrix.collapsed.wing.isos.txt 2.53MB VST-counts-heatmapHomalodiscaWingGenes.R 5KB VST-counts-heatmapEntyliaWingGenes.R 5KB CandidateWingRelatedGenes_OrthoTranscriptIDs.txt 2KB GoTermsMap.py 4KB goTrimmomatic_paired_pipelined.sh 3KB README.md 2KB unnamed-chunk-11-1.png 4KB ECEF_Genes_Lengths.txt 712KB GoSeq_Walkthrough.md 10KB EC_DESeq2_resdata.tab 6.63MB bowtie2_func.sh 4KB TPM_Normalization_Files Hvit_Scaled_SizeNormed_Integer_TPM.matrix 2.26MB Ecar_SizeNormed_Integer_TPM.matrix 2.6MB
tpm_normalization.pdf 268KB ECEF_allSamples.isoform.TPM.not_cross_norm 4.39MB Ofas_Scaled_SizeNormed_Integer_TPM.matrix 828KB TPM_normalization_scaling.md 14KB tpm_normalization.Rmd 7KB HV_allSamples.isoform.TPM.not_cross_norm 3.78MB Ofas_i5k.genes.isoform.TPM.not_cross_norm.matrix 1.13MB EC-top30Abd_GoSeq_Wallenius.tab 16KB dev read_processing_2020 goEntap_uniref_pipelined.sh 2KB goTrimmomatic_polyA_pipelined.sh 3KB goBowtie2_Filter.sh 2KB srun_Trinity_pipelined.sh 2KB goRSEM.sh 3KB goEntap_pipelined.sh 2KB goTrimmomatic_paired_pipelined.sh 3KB 2020_library_basenames.txt 5KB 2020_library_information.txt 14KB bowtie2_func.sh 4KB资源评论
