机器学习xgboost svm 大肠杆菌启动子启动强度的预测完整代码数据可直接运行

"consensus.cluster" "chr" "start" "end" "strand" "dominant_ctss" "tpm" "tpm.dominant_ctss" "q_0.1" "q_0.9" "interquantile_width" 1 "chrI" 6529 6572 "+" 6559 0.890871110104097 0.445435555052048 6548 6572 25 3 "chrI" 8071 8087 "+" 8087 1.07646925804245 0.445435555052048 8072 8087 16 4 "chrI" 9321 9368 "+" 9327 0.742392591753414 0.482555184639719 9322 9338 17 5 "chrI" 11272 11401 "+" 11329 13.8456218362012 7.83224184299852 11295 11329 35 6 "chrI" 11714 11720 "+" 11715 0.371196295876707 0.259837407113695 11715 11720 6 8 "chrI" 12533 12873 "+" 12683 24.0164003432229 2.85821147825064 12587 12779 193 9 "chrI" 12926 12949 "+" 12934 1.00222999886711 0.482555184639719 12932 12949 18 10 "chrI" 16974 17037 "+" 16988 2.56125444154928 0.482555184639719 16980 17017 38 11 "chrI" 18001 18055 "+" 18031 4.45435555052048 1.93022073855888 18006 18039 34 13 "chrI" 23371 23403 "+" 23384 1.03934962845478 0.593914073402731 23372 23403 32 14 "chrI" 23755 23780 "+" 23774 2.22717777526024 0.779512221341085 23765 23774 10 16 "chrI" 24617 24639 "+" 24637 0.334076666289036 0.222717777526024 24637 24639 3 17 "chrI" 24778 24930 "+" 24834 9.79958221114507 1.81886184979586 24834 24910 77 18 "chrI" 24982 25124 "+" 24994 13.7713825770258 3.11804888536434 24991 25055 65 23 "chrI" 30112 30129 "+" 30125 1.67038333144518 0.779512221341085 30118 30125 8 24 "chrI" 31065 31377 "+" 31242 46.2510584662377 14.9592107238313 31147 31242 96 25 "chrI" 31418 31639 "+" 31521 11.1358888763012 3.6748433291794 31521 31572 52 26 "chrI" 31689 32037 "+" 31729 18.3370970163093 2.7839722190753 31715 31895 181 30 "chrI" 32399 32609 "+" 32400 1.07646925804245 0.222717777526024 32400 32585 186 31 "chrI" 32656 32700 "+" 32679 2.37565629361092 0.816631850928755 32671 32689 19 34 "chrI" 33280 33472 "+" 33359 190.646417562277 107.72116506342 33348 33365 18 35 "chrI" 33537 33580 "+" 33558 0.668153332578073 0.222717777526024 33557 33580 24 36 "chrI" 33655 34599 "+" 34258 62.9177721511018 6.27321740031635 33863 34389 527 40 "chrI" 35015 35473 "+" 35107 66.7410939986319 30.5865747802407 35057 35185 129 41 "chrI" 35513 35935 "+" 35794 27.6912436724023 6.38457628907936 35558 35841 284 43 "chrI" 36462 36780 "+" 36525 21.7892225679627 6.97849036248209 36511 36587 77 44 "chrI" 37337 37551 "+" 37415 12.3237170231067 7.64664369506016 37380 37461 82 45 "chrI" 37605 37632 "+" 37606 0.853751480516426 0.334076666289036 37606 37632 27 46 "chrI" 37914 37927 "+" 37916 0.445435555052048 0.334076666289036 37916 37921 6 48 "chrI" 38404 38424 "+" 38424 0.259837407113695 0.148478518350683 38423 38424 2 49 "chrI" 38563 38565 "+" 38565 0.296957036701366 0.185598147938353 38564 38565 2 50 "chrI" 39162 39286 "+" 39205 109.205950246927 25.0186303420901 39200 39256 57 51 "chrI" 39343 39421 "+" 39354 1.67038333144518 0.779512221341085 39344 39387 44 52 "chrI" 39472 39561 "+" 39540 1.89310110897121 0.445435555052048 39515 39561 47 54 "chrI" 40017 40032 "+" 40032 0.779512221341085 0.334076666289036 40018 40032 15 56 "chrI" 40147 40335 "+" 40335 1.55902444268217 0.816631850928755 40149 40335 187 57 "chrI" 40405 40422 "+" 40406 0.334076666289036 0.185598147938353 40406 40422 17 59 "chrI" 40707 40710 "+" 40710 0.259837407113695 0.148478518350683 40708 40710 3 62 "chrI" 41167 41199 "+" 41171 0.445435555052048 0.334076666289036 41171 41186 16 63 "chrI" 41282 41295 "+" 41287 0.593914073402731 0.222717777526024 41283 41291 9 64 "chrI" 41347 41390 "+" 41350 1.03934962845478 0.408315925464378 41348 41390 43 65 "chrI" 41476 41484 "+" 41477 0.222717777526024 0.111358888763012 41477 41484 8 66 "chrI" 42118 42249 "+" 42155 17.5575847949682 3.34076666289036 42155 42199 45 67 "chrI" 42279 42433 "+" 42395 9.24278776733 1.63326370185751 42306 42409 104 71 "chrI" 43434 43540 "+" 43539 5.12250888309856 0.55679444381506 43438 43539 102 72 "chrI" 43688 43715 "+" 43698 0.334076666289036 0.111358888763012 43689 43698 10 73 "chrI" 43772 43798 "+" 43782 2.22717777526024 1.74462259062052 43782 43787 6 74 "chrI" 45667 46002 "+" 45811 181.849065349999 26.4662958960092 45761 45895 135 75 "chrI" 46057 46158 "+" 46150 4.15739851381912 0.779512221341085 46115 46158 44 77 "chrI" 46414 46426 "+" 46415 0.296957036701366 0.185598147938353 46415 46426 12 78 "chrI" 46491 46516 "+" 46492 0.668153332578073 0.296957036701366 46492 46516 25 79 "chrI" 46606 46656 "+" 46626 0.965110369279438 0.296957036701366 46622 46633 12 80 "chrI" 46731 46749 "+" 46749 0.965110369279438 0.334076666289036 46732 46749 18 81 "chrI" 46826 46831 "+" 46827 0.259837407113695 0.148478518350683 46827 46831 5 82 "chrI" 46888 46961 "+" 46960 0.259837407113695 0.148478518350683 46897 46960 64 85 "chrI" 47621 47719 "+" 47718 3.08092925577667 1.11358888763012 47643 47718 76 86 "chrI" 47876 47893 "+" 47880 0.334076666289036 0.111358888763012 47877 47893 17 87 "chrI" 48005 48096 "+" 48057 3.08092925577667 0.965110369279438 48053 48087 35 88 "chrI" 48437 49087 "+" 48795 50.3713373504691 6.05049962279032 48534 48910 377 89 "chrI" 49502 49523 "+" 49503 0.705272962165743 0.445435555052048 49503 49504 2 90 "chrI" 50004 50008 "+" 50006 0.890871110104097 0.51967481422739 50005 50008 4 91 "chrI" 52837 52853 "+" 52843 1.2620674059808 0.51967481422739 52843 52853 11 93 "chrI" 56554 56568 "+" 56561 0.334076666289036 0.185598147938353 56561 56568 8 95 "chrI" 56948 56984 "+" 56968 0.668153332578073 0.445435555052048 56968 56973 6 96 "chrI" 57424 57436 "+" 57428 0.927990739691767 0.222717777526024 57425 57436 12 97 "chrI" 57456 57609 "+" 57506 212.027324204775 111.915683206827 57496 57524 29 100 "chrI" 61260 62019 "+" 61300 124.981792821687 35.3378873674625 61274 61971 698 101 "chrI" 62069 62187 "+" 62151 4.78843221680952 1.11358888763012 62086 62176 91 102 "chrI" 62293 62298 "+" 62294 0.334076666289036 0.185598147938353 62294 62298 5 103 "chrI" 62677 62680 "+" 62680 0.259837407113695 0.148478518350683 62678 62680 3 104 "chrI" 62747 62845 "+" 62808 57.7210240088279 28.0995595978667 62765 62808 44 105 "chrI" 62919 63207 "+" 63006 7.64664369506016 1.03934962845478 62938 63071 134 106 "chrI" 63485 63507 "+" 63488 1.15070851721779 0.55679444381506 63486 63507 22 107 "chrI" 64003 64079 "+" 64079 0.853751480516426 0.296957036701366 64005 64079 75 108 "chrI" 64265 64311 "+" 64290 2.7839722190753 1.48478518350683 64266 64290 25 109 "chrI" 64360 64415 "+" 64362 1.63326370185751 0.965110369279438 64362 64406 45 110 "chrI" 64521 64523 "+" 64522 0.445435555052048 0.222717777526024 64522 64523 2 111 "chrI" 64576 64580 "+" 64578 1.29918703556847 0.853751480516426 64577 64580 4 112 "chrI" 64651 64770 "+" 64684 2.07869925690956 0.853751480516426 64684 64764 81 114 "chrI" 68691 68747 "+" 68703 3.26652740371502 0.890871110104097 68703 68735 33 116 "chrI" 69937 70160 "+" 70132 7.31256702877113 1.2620674059808 70031 70136 106 117 "chrI" 70203 70339 "+" 70326 4.45435555052048 1.93022073855888 70221 70326 106 118 "chrI" 70403 70438 "+" 70438 0.927990739691767 0.705272962165743 70404 70438 35 119 "chrI" 70501 70603 "+" 70507 2.63549370072462 1.03934962845478 70502 70603 102 120 "chrI" 70688 70689 "+" 70689 4.04603962505611 4.04603962505611 70689 70689 1 121 "chrI" 70745 70747 "+" 70747 0.296957036701366 0.148478518350683 70746 70747 2 126 "chrI" 71634 73076 "+" 71759 13657.0912375254 10776.0511870783 71759 71767 9 127 "chrI" 73417 73486 "+" 73486 7.31256702877113 1.2620674059808 73418 73486 69 128 "chrI" 73656 73674 "+" 73674 0.222717777526024 0.111358888763012 73662 73674 13 129 "chrI" 73809 74043 "+" 73921 20.8612318282709 5.90202110443964 73909 74001 93 130 "chrI" 74725 74745 "+" 74730 1.93022073855888 1.55902444268217 74726 74730 5 132 "chrI" 76337 77472 "+" 76401 1000.59673516525 285.227233751662 76392 76932 541 133 "chrI" 77493 77590 "+" 77494 1.2620674059808 0.334076666289036 77494 77580 87 136 "chrI" 78230 78240 "+" 78238 0.296957036701366 0.185598147938353 78231 78238 8 137 "chrI" 78337 78403 "+" 78352 0.779512221341085 0.51967481422739 78338 78403 66 139 "chrI" 78625 78927 "+" 78796 4.41723592093281 0.705272962165743 78645 78824 180 140 "chrI" 79