代谢网络分析
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2021-02-19
18:29:14
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代谢网络分析 （139个子文件） 
project_bibliography.bib 219KB Bok1.csv 2KB reactionmap.csv 2KB Bok2.csv 803B rxndescr.cvs 179B omni_driver.gms 1KB notebook.ipynb 3KB experimentaldata.json 499B runsim.m 41KB runsim.m 41KB gxFBA.m 36KB computesplits.m 26KB computesplits.m 26KB extractflux.m 15KB extractflux.m 15KB QPmindist.m 11KB QPmindist.m 11KB run_omni.m 8KB omni.m 8KB HighFluxBackbone.m 5KB bar3Dplot.m 5KB bar3Dplot.m 5KB compdist.m 5KB compdist.m 5KB set_constr_irrev.m 5KB print_gams_input.m 5KB iterateoptimobj.m 4KB fluxreport.m 4KB fluxreport.m 4KB constrainfluxes.m 4KB constrainfluxes.m 4KB singleparamtest.m 3KB optreqanalysis.m 3KB optreqanalysis.m 3KB fmindist.m 3KB fmindist.m 3KB conv_to_irrev.m 3KB omni_example.m 2KB parse_gams_omni_output.m 2KB biomassPrecursorCheck.m 2KB remove_rxns.m 2KB analyzeHFB.m 2KB splitdists.m 2KB testfluxes.m 1KB barplot2.m 1KB barplot2.m 1KB scatterplot.m 1KB glucosebounds.m 1KB create_gams_input.m 1KB split.m 1015B specificagreement.m 998B sel_matrix.m 950B lindo2gams.m 817B printShadowPriceEX.m 784B EXreactinfo.m 781B makeplots.m 762B objectivecomparison.m 690B printShadowPrice.m 627B reactinfo.m 621B unpack_fba_model.m 455B simwizard.m 378B testobjectives.m 360B testconstraints.m 317B eucdist.m 313B initwgurobi.m 306B optimobj.m 245B optimobjsolve.m 201B calculability.m 83B modeldata.mat 406KB modeldata.mat 406KB iJR904_aer_gmm_omni.mat 208KB expdata.mat 1KB expdata.mat 1KB exp_splitratios.mat 983B reactionmaps.mat 636B reactionmaps.mat 636B reactionmaps.mat 636B objectivemap.mat 608B readme.md 8KB flowchart.odg 16KB FBA.ods 12KB cplex.opt 34B
rapport.pdf 1.39MB
reactionmap_example.png 15KB runsim.py 35KB GlobalFluxOrganization.py 22KB gx-FBA.py 20KB mindist.py 7KB cogs-fba.py 7KB loadData.py 6KB MPStoCobraModel.py 6KB QPmindist.py 6KB modelmanipulation.py 6KB optimtest.py 5KB CalculabilityAnalysis.py 5KB FluxCoupling.py 4KB optreqanalysis.py 4KB constrainfluxes.py 3KB fluxreport.py 2KB compsplits.py 2KB共 139 条
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