F3UTER：查找3'未翻译的表达区域
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2021-02-11
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F3UTER-master.zip （67个子文件） 
F3UTER-master GTEx_predictions 
calculate_cncr_score.R 647B calculate_gtex_prediction_numbers.R 3KB generate_categorised_geneLists_and_tables.R 16KB generate_gtex_predictions.R 2KB merge_gtexErData_with_predictions.R 2KB categorise_er_tissue_specificity.R 8KB perform_cncr_analysis.R 6KB OmicFeature_generation transposons_overlap.R 2KB dna_structural_features.R 8KB expression_features.R 4KB nucleotide_frequency.R 2KB polyA_signal.R 2KB sequence_conservation.R 1KB Training_data_generate training_data_regions_generate.R 11KB LICENSE 34KB GTEx_predictions_RBP_analysis rbp_fimo_summarise.R 1KB images 
ecdf.png 282KB density.png 285KB rbp_method.PNG 1.98MB rbp_fimo_summary_plot.R 10KB get_fasta_er_predictions.R 1KB attract_db_filter_metaDataFile.R 408B attract_db_filter_pwmFile.pl 2KB README.md 3KB F3UTER_app app_functions.R 17KB www shiny_f3uter_homePage.png 234KB f3uter_accessing_tab.png 12KB f3uter_gene_table.png 179KB f3uter_input.png 32KB f3uter_genome_view.png 125KB
umu_logo.jpg 20KB
astexlogo.gif 4KB ucl_logo.png 3KB Thumbs.db 15KB f3uter_selecting_er.png 172KB f3uter_feature_plot.png 240KB app.R 39KB rsconnect shinyapps.io astx F3UTER.dcf 204B Uni-Multi_variate_analysis RF_vs_LR_analysis.R 4KB umap_analysis.R 3KB classification_models.pbs 202B run_classification_models.pl 380B univariate_analysis.R 49KB randomForestMultinomial_model.R 5KB elasticNetMultinomialLR_model.R 5KB make_ml_table.R 4KB summarise_multinomial_models.R 4KB plot_multinomial_models.R 3KB F3UTER_evaluation plot_roc_pr_curves.R 4KB run_f3uter_cv.pl 365B f3uter.pbs 120B f3uter_trained_model.R 1KB summarise_f3uter_cv.R 18KB f3uter_cv.R 6KB Bcell_validation permute_random_intergenic_ERs.pl 1015B compare_knownThreePrime_with_polya.R 2KB merge_erData_with_predictionData.R 1KB
generate_Bcell_ers.txt 953B compare_BcellErs_with_polya.R 14KB regions_to_exclude_for_permutation.R 1KB generate_Bcell_predictions.R 1KB ER_data_processing er_split_by_tissue.R 549B er_3prime_vs_5prime_analysis.R 10KB er_dataset_generate_for_analysis.R 8KB OMIM_gtex_tissue_name_formatting.csv 9KB er_initial_processing.pl 5KB README.md 7KB资源评论
