non-coinciding_cDNA_starts
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2021-05-12
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non-coinciding_cDNA_starts-master.zip （41个子文件） 
non-coinciding_cDNA_starts-master Normalisation_and_density_graphs_eIFA3 
normalisation_and_density_graph-eIFA4.R 6KB .Rhistory 3KB 5p_marker-read_through_vs_truncated-cDNAs-mapping FASTQ2FASTA-swap_barcode_to_header-readThrough.py 1KB mapping_to_genome-PTBP1_iCLIP-pipeline.sh 3KB mapping_to_transcriptome-eIFA3_iCLIP-pipeline.sh 3KB Other_scripts get_density_of_deletions.py 3KB get_density_of_C2T_transitions.py 3KB kmer_finder.py 2KB flankBEDpositions.py 1KB Genome_mapping_of_PTBP1_U2AF65_iCLIP swap_barcode_to_header.py 905B mapping_to_genome-PTBP1_U2AF65_CLIP-pipeline.sh 2KB mapping_to_genome-PTBP1_U2AF65_iCLIP-pipeline.sh 3KB .DS_Store 12KB Identify_significantly_cross-linked_clusters 
genes.gtf.gz 767KB BEDtoXlink.py 1007B get_cross-link_clusters.sh 1KB BEDsum-iCount.py 1KB cDNAstart-cDNAend-peak_finder_and_density_graphs_eIFA3 draw_a_density_map_around_cDNAstart-end-peaks.R 8KB get_cDNAend_peaks.R 2KB select_top1000_transcripts.R 1KB main_get_cDNAstart-end_peaks.sh 1KB getRNAmapPositions-both-directions-filter100_100.py 3KB get_cDNAstart_peaks.R 2KB README.md 9KB Normalisation_and_density_graphs_PTBP1_U2AF65 normalisation_and_density_graph-PTBP1.R 9KB flankBEDpositionsCustom.py 1KB getStartAndEnd-BED.py 1KB normalisation_and_density_graph-PTBP1.sh 2KB HeatMaps_of_PTBP1-motifs_around-eCLIP-iCLIP-irCLIP-clusters-PTBP1 draw-HeatMap.R 983B data PTBP1-irCLIP.3nt.peaks.3nt.clusters.bed.gz 10.31MB kmers-PTBP1-motifs-iCLIP3-Jan-zscore300.tab 414B PTBP1-iCLIP1.3nt.peaks.3nt.clusters.bed.gz 10.23MB PTBP1-eCLIP.3nt.peaks.3nt.clusters.bed.gz 989KB PTBP1-iCLIP2.3nt.peaks.3nt.clusters.bed.gz 1.83MB make_HeatMap.sh 882B flank_clusters.py 2KB kmer_coverage-grouped_clusters.py 5KB get_cluster_length.R 326B Transcriptome_mapping_of_eIF4A3_iCLIP swap_barcode_to_header.py 904B mapping_to_transcriptome-eIFA3_iCLIP-pipeline.sh 3KB mapping_to_transcriptome-eIFA3_CLIP-pipeline.sh 3KB资源评论
