bio-cwl-tools:有关生物学，生命科学相关应用程序的CWL CommandLineTools说明
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2021-05-18
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bio-cwl-tools:有关生物学，生命科学相关应用程序的CWL CommandLineTools说明 （210个子文件） 
.all-contributorsrc 3KB GATK-HaplotypeCaller.cwl 41KB GATK-SelectVariants.cwl 29KB GATK-VariantFiltration.cwl 24KB bowtie_align.cwl 20KB GATK-SplitNCigarReads.cwl 20KB bowtie2_align.cwl 19KB spades.cwl 15KB unicycler.cwl 12KB picard_AddOrReplaceReadGroups.cwl 7KB fastq_dump.cwl 7KB manorm.cwl 7KB bedtools_genomecov.cwl 7KB bismark_extract_methylation.cwl 7KB lofreq_call.cwl 6KB hopach.cwl 6KB bowtie2_build.cwl 6KB picard_CreateSequenceDictionary.cwl 6KB trim_galore.cwl 6KB fastqc_2.cwl 5KB GATK-ApplyBQSR.cwl 5KB homer-annotate-peaks-hist.cwl 5KB GATK-MarkDuplicates.cwl 5KB bowtie_build.cwl 5KB crossmap.cwl 5KB kraken2.cwl 5KB bamtools_stats.cwl 5KB STAR-Align.cwl 4KB Lancet.cwl 4KB nanoplot.cwl 4KB deeptools_alignmentsieve.cwl 4KB samtools_stats.cwl 4KB nextclade.cwl 4KB homer-make-metagene-profile.cwl 4KB preseq_lc_extrap.cwl 4KB homer-make-tag-directory.cwl 4KB fastx_quality_stats.cwl 4KB halliftover.cwl 4KB MashMap.cwl 3KB deseq_advanced.cwl 3KB pca.cwl 3KB bismark_align.cwl 3KB multiqc.cwl 3KB extract_fastq.cwl 3KB bismark_report.cwl 3KB GATK-BaseRecalibrator.cwl 3KB bedtools_intersect.cwl 3KB bandage-image.cwl 3KB bzip2_compress.cwl 3KB bedtools_getfasta.cwl 3KB Kallisto-Quant.cwl 3KB deeptools_bamCoverage.cwl 3KB picard_MarkDuplicates.cwl 2KB nucleoatac.cwl 2KB odgi_sort.cwl 2KB GATK-FixMateInformation.cwl 2KB qualimap_rnaseq.cwl 2KB fastp.cwl 2KB bedtools_merge.cwl 2KB mafft.cwl 2KB bedtools_bamtobed_2.cwl 2KB odgi_viz.cwl 2KB custom_bash.cwl 2KB bismark_prepare_genome.cwl 2KB bowtie2.cwl 2KB bandage-info.cwl 2KB BWA-Mem.cwl 2KB prefetch.cwl 2KB odgi_bin.cwl 2KB grep.cwl 2KB odgi_build.cwl 2KB minimap2_paf.cwl 2KB ivar_trim.cwl 2KB picard_SortSam.cwl 2KB phantompeakqualtools.cwl 2KB minimap2_sam.cwl 2KB samtools_view_count_alignments.cwl 2KB deeptools_plotFingerprint.cwl 1KB component_segmentation.cwl 1KB odgi_pathindex.cwl 1KB prefetch_fastq.cwl 1KB awk.cwl 1KB lofreq_viterbi.cwl 1KB samtools_view_filter.cwl 1KB deeptools_plotCoverage.cwl 1KB GATK-FilterVariantTranches.cwl 1KB GATK-CNNScoreVariants.cwl 1KB seqkit_rmdup.cwl 1KB Pizzly.cwl 1KB samtools_sort.cwl 1016B STAR-Index.cwl 1014B GATK-FilterMutectCalls.cwl 986B fastqc_1.cwl 922B bedtools_bamtobed_1.cwl 887B Kallisto-Index.cwl 869B BWA-Index.cwl 792B bedtools_slop_clip_to_chrom_boundaries.cwl 785B samtools_fastq.cwl 782B samtools_faidx.cwl 777B bedtools_genomecov_bed2bedgraph.cwl 763B共 210 条
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