pMHC2Pred
pMHC2Pred是迈向基于结构预测肽与MHC II类分子结合的第一步。
pMHC2Pred的前提条件:
数据
1. PDB of MHC class II molecule
2. Template of the peptide
3. Peptide sequences with activity
工具
1. DatasetDivision
Download: https://sourceforge.net/projects/qsardatasetdivisiongui/
2. FoldX
Download and manual: http://foldxsuite.crg.eu/documentation#manual
3. ZDOCK
Download and manual: http