driver-benchmarking:各种软件的突变基准测试的管道
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2021-05-12
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driver-benchmarking:各种软件的突变基准测试的管道 （110个子文件） 
export_gene_list.pl.bk 62B sampleConfig.cfg 8KB sampleConfig.cfg 1KB sampleConfig.cfg 1KB sampleConfig.cfg 503B sampleConfig.cfg 348B sampleConfig.cfg 329B sampleConfig.cfg 277B sampleConfig.cfg 272B sampleConfig.cfg 272B sampleConfig.cfg 271B sampleConfig.cfg 251B sampleConfig.cfg 225B sampleConfig.cfg 201B sampleConfig.cfg 158B sampleConfig.cfg 131B sampleConfig.cfg 56B cancer_gene_census.csv 57KB pancancer_driver_list.csv 65B cancer_gene_census.csv 62B ucsc_longest_transcript_hg18.dat 483KB ucsc_longest_transcript_hg19.dat 445KB
oncoIMPACT.exe 72B .gitignore 279B README.md 78B run_benchmark_pipeline.pl 39KB pair_wise_comparision.pl 13KB parse_to_standard_output.pl 11KB run_FATHMM.pl 8KB run_S2N.pl 5KB run_OncodriveCIS.pl 5KB run_OncodriveCLUST.pl 5KB filter_and_update_matrices.pl 4KB run_driver_net.pl 4KB get_status.pl 4KB run_CHASM.pl 4KB transf_scores.pl 4KB run_OncodriveFM.pl 4KB parse_to_standard_output.pl 3KB parse_to_standard_output.pl 3KB parse_to_standard_output.pl 3KB run_transFIC.pl 3KB run_HotNet2.pl 2KB run_HotNet2.pl 2KB parse_to_standard_output.pl 2KB parse_to_standard_output.pl 2KB construct_adj_matrix.pl 2KB run_DawnRank.pl 2KB run_NetBox.pl 2KB parse_to_standard_output.pl 2KB run_ActiveDriver.pl 2KB parse_to_standard_output.pl 2KB parse_to_standard_output.pl 2KB parse_to_standard_output.pl 1KB parse_to_standard_output.pl 1KB parse_to_standard_output.pl 1KB parse_to_standard_output.pl 1KB parse_to_standard_output.pl 1KB run_MutSigCV.pl 1KB parse_to_standard_output.pl 1012B parse_to_standard_output.pl 1002B parse_to_standard_output.pl 986B parse_to_standard_output.pl 413B analyse_patient_driver.pl 132B 11_Filter_And_Merge_Module_Impact.pl 76B 10_Cluster_Algo_pvalue_table.pl 71B compute_significant_impact.pl 69B run_all_test_pvalue_table.pl 68B 10_Cluster_Algo_impact.pl 65B pathway_ana_20150120.pl 63B 10_Cluster_Algo_fast.pl 63B Construct_network.pl 60B plot_basic_stats.pl 59B export_gene_list.pl 59B 10_Cluster_Algo.pl 58B compute_all_js.pl 57B test_all_param.pl 57B random_sample.pl 56B pathway_ana.pl 54B oncoIMPACT.pl 53B pair_wise_comparision.pl~ 6KB parse_to_standard_output.pl~ 1KB parse_to_standard_output.pl~ 1KB parse_to_standard_output.pl~ 413B parse_to_standard_output.pl~ 411B run_all_test_pvalue_table.pl~ 69B pathway_ana.pl~ 55B oncoIMPACT.pl~ 54B choseDelta-v2.py 5KB choseDelta-v2.py 5KB choseDelta.py 4KB choseDelta.py 4KB createRankFile.py 2KB createRankFile.py 2KB ActiveDriver_PTM.R 4KB generate_plots.R 4KB ActiveDriver_phospho.R 4KB compute_pVal_fdr.R 1KB DawnRank.R 1018B S2N.R 715B共 110 条
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