MicroExonator:用于Microexon发现和定量的Snakemake管道 （177个子文件） 
make.bat 799B gencode.vM16.annotation.bed12 0B VastDb.bed12 0B .buildinfo 230B mm10.60way.phyloP60way.bw 0B theme.css 121KB basic.css 13KB pygments.css 4KB badge_only.css 3KB discovery_and_quantification.doctree 65KB differential_inclusion_analysis.doctree 22KB setup.doctree 12KB index.doctree 10KB install.doctree 5KB licence.doctree 5KB support.doctree 3KB .DS_Store 6KB .DS_Store 6KB fontawesome-webfont.eot 162KB mm10.fa 0B github_clone 0B gencode.vM16.annotation.gtf 0B
discovery_and_quantification.html 28KB differential_inclusion_analysis.html 13KB setup.html 9KB index.html 7KB install.html 7KB licence.html 6KB support.html 5KB search.html 5KB genindex.html 4KB objects.inv 497B jquery-3.5.1.js 281KB jquery.js 87KB underscore-1.3.1.js 34KB searchtools.js 16KB underscore.js 12KB language_data.js 11KB searchindex.js 10KB doctools.js 9KB theme.js 5KB html5shiv-printshiv.min.js 4KB html5shiv.min.js 3KB badge_only.js 934B documentation_options.js 350B cluster.json 1KB Makefile 638B hg19_GT_AG_U2_3.good.matrix 1KB mm10_GT_AG_U2_3.good.matrix 1KB mm10_GT_AG_U2_5.good.matrix 968B hg19_GT_AG_U2_5.good.matrix 967B mm10_GT_AG_U2_3.good.matrix 0B mm10_GT_AG_U2_5.good.matrix 0B README.md 1KB README.md 1KB README.md 720B environment.pickle 28KB
unnamed-chunk-4-1.png 29KB unnamed-chunk-5-1.png 27KB file.png 286B plus.png 90B minus.png 90B sashimi-plot.py 37KB Snakepool.py 22KB get_isoforms2.py 21KB ME_SJ_coverage.py 12KB Get_annotated_microexons.py 11KB high_confident_list.py 10KB Snakepool.backup.py 10KB config.py 9KB ME_filter1.py 8KB GetPSI.py 7KB alingment_pre_processing_round2_bowtie.py 7KB counts_to_PSI.py 6KB alingment_pre_processing.py 6KB ME_centric_table.py 5KB row_ME2.py 4KB get_diff_ME_single_cell.py 4KB whippet_delta_to_ME.py 3KB SJ_tags_generator_for_micro_exons.py 3KB Get_introns_from_sam.py 3KB Get_splicing_PWMs.py 3KB Get_exons_from_sam.py 3KB discovery_stats.py 2KB conf.py 2KB GTFtoBED12.py 2KB Micro_exons_tags.py 1KB round2_ME_reads_fastq2.py 1KB Get_fasta_from_bed12.py 1KB merge_quant.py 1KB Replace_PSI_whippet.py 1KB coverage_sample_filter.py 1KB Filter1_round2.py 1KB split_paired_end.py 1KB merge_pairs.py 860B split_coverage.py 859B Get_ME_matches.py 801B sashimi_input_generator.py 755B write_bam_tsv.py 722B validate_fastq.py 643B共 177 条
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