WRC-genome-paper:西部红杉基因组论文的相关脚本和数据文件
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2021-04-14
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WRC-genome-paper-main.zip （33个子文件） 
WRC-genome-paper-main Supplementary data 
Supplementary_Data_5-all_S_lines_corrected.tar 3.21MB README.MD 2KB
Supplementary_Data_4-vep_1.3_annotation_final.xlsx 3.62MB Supplementary_Data_1-Annotation_validation_sequences.fasta 153KB Supplementary_Data_3-gene_functions.xlsx 4.31MB Supplementary_Data_6-S4_outlier_snp_fate_table.xlsx 531KB Supplementary_Data_7-S4_outlier_snp_annotation.xlsx 611KB
Supplementary_Data_2-genome_annotation.gff3.gz 9.48MB LICENSE 7KB Raw data for scripts and figures README.MD 235B
parents_strata.txt 4KB significant_snps_chisq_holm_1e-5.txt 66KB melted_expectations_halving_obs_exp_from_obs_FS_exp_removed.txt.gz 2.1MB vep_1.3_annotation_final_compound_effects_removed.txt.gz 967KB scaffold_lengths_scaffolds_in_gff_and_vcf_v3.1c.txt 46KB diverse_pop_ibc.tar.gz 5KB parent_geog_locations_corrected.txt 2KB diverse_pop_snp_maf.txt 1.27MB scaffolds_with_genes_final_annotation.txt 23KB S_lines_alleles.tar.gz 2.89MB diverse_pop.g95minmeanDP15maxmeanDP60minQ30AB28.maf03ld.ld.gz 3.29MB S_lines_ibc.tar.gz 5KB README.md 113B Scripts README.MD 2KB LD_plots.R 8KB S_line_genotype_correction.R 96KB PopGenome_analysis.R 142KB inbreeding_coefficients.R 8KB geographic_maps.R 5KB S_line_pop_gen_and_heterozygosity.R 301KB variant_effect_predictions_and_snp_annotation.R 13KB LD_pruning.R 2KB genetic_differentiation.R 16KB资源评论
