ncbi_acc2gtdb_acc
将NCBI genbank加入映射到GTDB加入
战略
# genbank assembly
NCBI assembly_accession (1) <- (1) ftp-url/fna.gz (1) <- (n) NCBI accession
# gtdb
NCBI assembly_accession (1) -> (1) GTDB accession
工具
脚步
# -------------- download meta data -----------------
# download assembly summary files
wget -c https://ftp.ncbi.nlm.nih.gov/genomes/genbank/archaea/assembly_summary.txt -O as-genbank-archaea.t
