cfDNA:cfDNA分析工作流程
需积分: 10 91 浏览量
2021-04-19
17:40:20
上传
评论
收藏 8.13MB ZIP 举报
cfDNA-master.zip （53个子文件） 
cfDNA-master 
.gitattributes 66B workflow envs cfDNA.yml 230B background.yml 137B overlays.yml 157B scripts WPS extractFromBAM_RegionBed_WPS_Cov.py 9KB overlays.py 3KB samtools 1.32MB expression_analysis snakemake_correlation_table.R 1KB fft_path.R 9KB extractReadStartsFromBAM_Region_WPS.py 7KB snakemake_correlation_plots.R 2KB convert_files.py 3KB snakemake_correlation_rank_table.R 2KB schemas samples.schema.yaml 734B config.schema.yaml 664B regions.schema.yaml 474B snakefile_WPS.smk 8KB config README.md 3KB regions.tsv 58B example.config.yml 1KB samples.tsv 288B LICENSE 1KB README.md 10KB resources blacklists UCSC UCSC_gap.hg19.bed 12KB UCSC_gap.hg38.bed 21KB download.md 227B metadata 
UCSC_gap.gh38.txt.gz 12KB UCSC_gap.hg19.txt.gz 7KB universal_blacklist.hg19.bed 27KB ENCODE hg19-blacklist.v2.bed 34KB hg38-blacklist.v2.bed 26KB download.md 265B metadata GRCh38.metadata.controls.txt.gz 41KB hg19.metadata.controls.txt.gz 39KB
hg19-blacklist-README.pdf 1.38MB universal_blacklist.hg38.bed 25KB protein_atlas labels_Extended.tsv 10KB labels_Blood.tsv 912B labels_Tissue.tsv 1KB RNAtableBlood.tsv.gz 447KB RNAtableTissue.tsv.gz 1.52MB RNAtableExtended.tsv.gz 2.95MB genome hg19.fa.genome 2KB hg38.fa.genome 4KB hg19.fa.genome.regular_autosomes 335B hg38.fa.genome.regular_autosomes 335B README.md 1KB annotations transcriptAnno-GRCh37.103.tsv.gz 640KB transcriptAnno-GRCh38.103.tsv.gz 677KB .editorconfig 249B .gitignore 511B CHANGELOG.md 1KB snakefile_GE_analysis.smk 7KB
评论0