single-cell-curation:策动cellxgene数据集的代码和文档 （219个子文件） 
all_ontology.bash 2KB setup.cfg 31B create_yaml 0B create_yaml,R 3KB sample_metadata.csv 59.04MB sample_metadata.csv 49.11MB umap.2d.all2.csv 43MB sample_metadata.csv 29.87MB sample_metadata.csv 29.19MB sample_metadata.csv 28.84MB barcodes.csv 9.26MB tsne_tassic_2018_no_NA.csv 1.47MB features.csv 228KB cell_metadata.csv 182KB .gitignore 1KB
exon.counts.csv.gz 87.15MB exon.counts.csv.gz 52.08MB exon.counts_small.csv.gz 32.65MB Table_S4g_open_chromatin_metadata.tsv.gz 4.61MB hgnc_complete_set.txt.gz 3.4MB Table_S4e_snRNA_10X_v3_B_metadata.tsv.gz 2.69MB Table_S4d_snRNA_SMART_metadata.tsv.gz 1.98MB sample_metadata.csv.gz 1.92MB Table_S4a_scRNA_SMART_metadata.tsv.gz 1.88MB sample_metadata.csv.gz 1.69MB Table_S4c_scRNA_10X_v2_A_metadata.tsv.gz 1.13MB Table_S4h_DNA_methylation_metadata.tsv.gz 695KB Table_S4b_scRNA_10X_v3_A_metadata.tsv.gz 690KB GSE115746_complete_metadata_28706-cells.csv.gz 490KB Table_S4f_snRNA_10X_v3_A_metadata.tsv.gz 400KB features.tsv.gz 273KB features.tsv.gz 273KB features.tsv.gz 273KB features.tsv.gz 273KB GSE115746_accession_table.csv.gz 174KB features.tsv.gz 140KB hgnc_example.txt.gz 1KB pbmc3k-CSC-gz.h5ad 25.13MB Makefile 676B corpora_schema.md 13KB readme.md 12KB schema_guide.md 7KB README.md 4KB readme.md 3KB readme.md 3KB readme.md 2KB readme.md 2KB README.md 2KB readme.md 2KB readme.md 2KB readme.md 2KB readme.md 2KB email_draft_data_contributors.md 2KB readme.md 2KB CONTRIBUTING.md 811B SECURITY.md 358B CHANGELOG.md 117B test_validate.py 18KB test_remix.py 12KB remix.py 10KB validate.py 9KB gene_symbol.py 8KB LiCuration.py 6KB test_ontology.py 6KB create_biccn_ontology_table.py 5KB yaoCuration.py 4KB create_biccn_ontology_table.py 4KB create_biccn_ontology_table.py 3KB test_gene_symbol.py 3KB create_ontology_lookup_cell_type.py 3KB create_biccn_ontology_table.py 3KB reformat_add_metadata_10X_broad.py 3KB reformat_add_metadata_10X.py 3KB ontology.py 3KB ontology.py 3KB ontology.py 3KB add_labels.py 3KB create_ontology_lookup.py 3KB add_labels_general.py 2KB create_ontology_lookup_cell_type.py 2KB reformat_add_metadata_smart.py 2KB create_ontology_lookup_cell_type.py 2KB reformat_add_metadata.py 2KB cli.py 2KB reformat_add_metadata.py 2KB reformat_add_metadata.py 1KB reformat_add_metadata.py 1KB explore_all.py 1KB create_ontology_lookup_cell_type.py 1KB setup.py 934B create_ontology_lookup_dev_stage.py 858B create_ontology_lookup_tissue.py 854B filter_nan.py 845B all_concatenate.py 631B create_ontology_lookup_tissue.py 592B append_biccn_ontology.py 578B append_biccn_ontology.py 578B append_biccn_ontology.py 578B append_biccn_ontology.py 578B append_sex.py 552B共 219 条
- 1
- 2
- 3
资源评论
