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dtangle:高通量基因表达谱实验中的细胞类型反卷积
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cel:42个
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2021-05-22
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dtangle:一种用于细胞类型反卷积的方法 我们建议使用我们更新的反卷积方法hspe,可 软件 dtangle是用于单元格类型反卷积的R包。 R包可在 ,github或我的box: ( )上获得。 小插图 大量RNA-seq和微阵列:( ) 使用单细胞RNA-seq作为参考:( ) PBMC微阵列解卷积:( rmd ) 文件 1.“纠缠:精确而鲁棒的细胞类型反卷积”生物信息学(2019年) 我们有关生物信息学的出版物可在此处访问。 我们可以在此处找到用于复制分析结果的docker映像。 基准反卷积数据集的dtangle.data包可在 此处找到(源代码)。 我们的生物信息学论文中的分析脚本可在此处或此处找到
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dtangle:高通量基因表达谱实验中的细胞类型反卷积 (260个子文件)
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12_13_02_U133A_Mer_Latin_Square_Expt4_R3.CEL 11.39MB
12_13_02_U133A_Mer_Latin_Square_Expt1_R1.CEL 11.39MB
12_13_02_U133A_Mer_Latin_Square_Expt2_R3.CEL 11.39MB
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12_13_02_U133A_Mer_Latin_Square_Expt2_R2.CEL 11.36MB
12_13_02_U133A_Mer_Latin_Square_Expt3_R1.CEL 11.35MB
12_13_02_U133A_Mer_Latin_Square_Expt8_R1.CEL 11.35MB
12_13_02_U133A_Mer_Latin_Square_Expt11_R3.CEL 11.35MB
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12_13_02_U133A_Mer_Latin_Square_Expt8_R2.CEL 11.33MB
12_13_02_U133A_Mer_Latin_Square_Expt6_R1.CEL 11.33MB
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12_13_02_U133A_Mer_Latin_Square_Expt9_R1.CEL 11.33MB
12_13_02_U133A_Mer_Latin_Square_Expt13_R3.CEL 11.33MB
12_13_02_U133A_Mer_Latin_Square_Expt12_R3.CEL 11.33MB
12_13_02_U133A_Mer_Latin_Square_Expt14_R3.CEL 11.32MB
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12_13_02_U133A_Mer_Latin_Square_Expt9_R2.CEL 11.32MB
12_13_02_U133A_Mer_Latin_Square_Expt14_R1.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt13_R2.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt14_R2.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt10_R3.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt13_R1.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt10_R1.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt11_R2.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt6_R2.CEL 11.31MB
12_13_02_U133A_Mer_Latin_Square_Expt9_R3.CEL 11.3MB
12_13_02_U133A_Mer_Latin_Square_Expt11_R1.CEL 11.3MB
12_13_02_U133A_Mer_Latin_Square_Expt10_R2.CEL 11.25MB
anno.csv 1KB
DESCRIPTION 612B
GSE47774_SEQC_ILM_MAY.txt.gz 15.95MB
GSE47774_SEQC_ILM_BGI.txt.gz 15.76MB
GSE47774_SEQC_ILM_CNL.txt.gz 14.82MB
GSE47774_SEQC_ILM_NVS.txt.gz 14.14MB
GSE47774_SEQC_ILM_AGR.txt.gz 13.47MB
GSE47774_SEQC_LIF_PSU.txt.gz 10.38MB
GSE47774_SEQC_LIF_NWU.txt.gz 10.22MB
GSE47774_SEQC_LIF_SQW.txt.gz 9.91MB
GSE47774_SEQC_ILM_COH.txt.gz 7.09MB
GSE47774_SEQC_LIF_LIV.txt.gz 2.13MB
dtangle_2.0.9.tar.gz 1.53MB
blood.html 892KB
basic-deconvolution.html 873KB
sc_vignette.html 820KB
basic-deconvolution2.html 69KB
basic-deconvolution.html 66KB
scatter.jpg 38KB
LICENSE 34KB
makefile 2KB
makefile 616B
makefile 565B
makefile 471B
makefile 203B
makefile 95B
makefile 89B
basic-deconvolution.md 13KB
sc_vignette.md 6KB
blood.md 6KB
README.md 2KB
NAMESPACE 100B
basic-deconvolution.pdf 194KB
sc_vignette.pdf 170KB
scatter.pdf 10KB
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unnamed-chunk-9-1.png 26KB
unnamed-chunk-6-1.png 23KB
unnamed-chunk-8-1.png 10KB
unnamed-chunk-9-1.png 10KB
unnamed-chunk-10-1.png 10KB
ICeDT.R 22KB
ICeDT.R 21KB
dtangle2.R 15KB
simple_plot.R 13KB
plot_boxplots_fn.R 8KB
simple_compare.R 7KB
dtangle.R 7KB
CIBERSORT_mod.R 6KB
CIBERSORT_mod.R 6KB
CIBERSORT_mod.R 6KB
get_markers.R 6KB
sim.R 6KB
plot_sim.R 6KB
run_sim_fn.R 5KB
all_errors.R 4KB
test_dtangle2.R 4KB
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