mem:标记富集建模（MEM）
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2021-05-12
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mem-master.zip （69个子文件） 
mem-master 
.gitignore 40B NAMESPACE 401B
intro.txt 3KB vignettes Intro_to_Marker_Enrichment_Modeling_Analysis.Rmd 13KB installing.txt 1KB R rename_markers.R 762B create_labels.R 2KB MEM_function.R 9KB add_fileID_to_clusterID.R 365B MEM_RMSD.R 6KB format_data.R 628B choose_reference_pop.R 1KB choose_markers.R 795B create_labels_txt.R 2KB get_files.R 1KB add_cluster_ID.R 220B IQR_thresh.R 706B zero_reference.R 376B build_heatmaps.R 13KB data MEM_values.RData 6KB PBMC.RData 4.2MB MEM_matrix.Rdata 2KB pdfs 
nihms912131.pdf 3.02MB nihms-838883.pdf 1.83MB .Rbuildignore 28B 06_polarized_myeloid_example.Rmd 8KB EULA-MEM.txt 12KB 00_install_tools.Rmd 5KB 01_cGVHD_example.Rmd 10KB 02_bead_example.Rmd 6KB man MEM_values.Rd 2KB PBMC.Rd 3KB MEM_RMSD.Rd 3KB MEM.Rd 8KB build.heatmaps.Rd 3KB
02_bead_example.html 1017KB README.md 6KB 01_cGVHD_example.html 1.08MB 03_blood_cell_PBMC_example.html 1.1MB datafiles my_data_files drop_data_files_here.txt 30B scRNA-seq 2018-02-15 IDHA data with SIMLR clusters and patient IDs top 500 variable genes_Ungated_viSNE.fcs 1.95MB MCBead ALL_2018_mc_cbead_300_Ungated_viSNE_Ungated.fcs 3.14MB PBMC Monocytes_PBMC.fcs 841KB CD8Tcells_PBMC.fcs 1.46MB DCs_PBMC.fcs 226KB IgMposBcells_PBMC.fcs 585KB NKcells_PBMC.fcs 1.27MB CD4Tcells_PBMC.fcs 4.25MB IgMnegBcells_PBMC.fcs 144KB MiMB IL-10_cells_found_normalized_viable_viSNE_IL10_Pop6.fcs 4.58MB GM CSF + G CSF_cells_found_normalized_viable_viSNE_GCSF_GMSCF_Pop7.fcs 1.35MB IFNg_cells_found_normalized_viable_viSNE_IFNg_pop3.fcs 2.73MB LPS_cells_found_normalized_viable_viSNE_LPS_Pop1.fcs 4.24MB GM CSF + G CSF_cells_found_normalized_viable_viSNE_GCSF_GMCSF_Pop8.fcs 2.61MB LPS_cells_found_normalized_viable_viSNE_LPS_Pop2.fcs 1.11MB IL-4_cells_found_normalized_viable_viSNE_IL4_Pop4.fcs 1.8MB IL-4_cells_found_normalized_viable_viSNE_IL4_Pop5.fcs 842KB cGVHD 112018_cGVHD_Clustering_Data_FlowRepository.csv 37KB cGVHD Clustering Data FlowRepository_Ungated.fcs 28KB figures 
Gandelman-et-al-Haematologica-2019-Fig-1.png.jpg 92KB Roussel-et-al-MiMB-2019-Fig-1.jpg 2.84MB Diggins-et-al-Nature-Methods-2017-MEM-Fig-1.png.jpg 495KB LICENSE.MD 12KB 03_blood_cell_PBMC_example.Rmd 8KB 05_scRNA-seq_example.Rmd 9KB 04_try_your_data.Rmd 8KB MEM README.txt 363B DESCRIPTION 1KB MEM.Rproj 303B资源评论
