sortmerna：SortMeRNA：下一代序列过滤和比对工具
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2021-02-05
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sortmerna：SortMeRNA：下一代序列过滤和比对工具 （236个子文件） 
AUTHORS 294B t0_expected_alignment.blast 6KB ssw.c 35KB brz.c 30KB chd_ph.c 27KB cmph.c 22KB bdz_ph.c 22KB bdz.c 21KB bmz8.c 20KB bmz.c 20KB fch.c 16KB chm.c 12KB compressed_seq.c 10KB select.c 10KB jenkins_hash.c 9KB graph.c 8KB chd.c 8KB compressed_rank.c 8KB hash.c 6KB fch_buckets.c 5KB ssw_example.c 5KB buffer_entry.c 3KB buffer_manager.c 2KB cmph_structs.c 2KB vstack.c 1KB miller_rabin.c 1KB vqueue.c 1KB ChangeLog 5KB smr_utils.cmake 7KB FindRapidJson.cmake 2KB common 5.68MB COPYING 34KB sls_alp_sim.cpp 103KB sls_alp.cpp 65KB indexdb.cpp 64KB options.cpp 47KB output.cpp 35KB sls_alp_data.cpp 34KB sls_alignment_evaluer.cpp 34KB sls_pvalues.cpp 26KB alignment.cpp 24KB njn_localmaxstatutil.cpp 18KB paralleltraversal.cpp 17KB read.cpp 16KB minoccur.cpp 16KB readstats.cpp 13KB sls_alp_regression.cpp 13KB traverse_bursttrie.cpp 12KB index.cpp 11KB njn_dynprogprob.cpp 9KB processor.cpp 9KB cmd.cpp 9KB reader.cpp 8KB refstats.cpp 8KB njn_localmaxstat.cpp 7KB njn_dynprogproblim.cpp 6KB njn_localmaxstatmatrix.cpp 5KB bitvector.cpp 5KB gzip.cpp 5KB util.cpp 5KB references.cpp 4KB callbacks.cpp 4KB kseq_load.cpp 4KB njn_ioutil.cpp 4KB njn_random.cpp 4KB sls_basic.cpp 4KB read_control.cpp 3KB main.cpp 3KB main.cpp 2KB njn_dynprogprobproto.cpp 2KB writer.cpp 1KB wintime.cpp 1KB kvdb.cpp 1024B unistd.cpp 506B kvdb.cpp 310B .dirstamp 0B .dirstamp 0B Dockerfile 280B silva-bac-16s-id90.fasta 18.54MB set2_environmental_study_550_amplicon.fasta 17.79MB silva-euk-28s-id98.fasta 14.25MB silva-euk-18s-id95.fasta 12.65MB silva-bac-23s-id98.fasta 12.31MB silva-bac-16s-database-id85.fasta 12.14MB rfam-5s-database-id98.fasta 8.13MB set5_simulated_amplicon_silva_bac_16s.fasta 4.97MB silva-arc-16s-database-id95.fasta 4.66MB silva-arc-16s-id95.fasta 3.71MB rfam-5.8s-database-id98.fasta 2.17MB silva-arc-23s-id98.fasta 734KB gg_13_8_ref_set.fasta 27KB test_ref.fasta 2KB test_read.fasta 1KB set7_arc_bac_16S_database_match.fasta 1KB ref_GQ099317_forward_and_rc.fasta 244B illumina_GQ099317.fasta 144B ref_short_seqs.fasta 98B empty_file.fasta 0B set4_mate_pairs_metatranscriptomics.fastq 5.42MB set4_mate_pairs_metatranscriptomics_1.fastq 2.71MB共 236 条
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