MOFA2：多组因子分析V2（MOFA +）
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2021-02-12
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MOFA2：多组因子分析V2（MOFA +） （145个子文件） 
.BBSoptions 27B CITATION 3KB configure 124B matrix.csv 94KB DESCRIPTION 2KB Dockerfile 1KB .gitattributes 17B .gitignore 410B .gitmodules 75B model.hdf5 1.29MB MEFISTO_model.hdf5 293KB .Rapp.history 0B LICENSE 7KB README.md 300B matrix.mtx 9KB NAMESPACE 4KB NEWS 674B template_script.py 7KB setup.py 964B mefisto.R 43KB set_methods.R 33KB create_mofa.R 27KB get_methods.R 27KB enrichment.R 25KB plot_data.R 25KB prepare_mofa.R 25KB utils.R 24KB plot_weights.R 24KB calculate_variance_explained.R 22KB plot_factors.R 21KB load_model.R 17KB subset.R 16KB dimensionality_reduction.R 13KB run_mofa.R 10KB correlate_covariates.R 7KB QC.R 7KB make_example_data.R 6KB contribution_scores.R 6KB AllClasses.R 6KB compare_models.R 5KB AllGenerics.R 4KB predict.R 3KB template_script.R 3KB impute.R 3KB test_create_model.R 2KB cluster_samples.R 2KB test_prepare_model.R 2KB test_plot.R 1KB imports.R 345B basilisk.R 256B test_load_model.R 220B testthat.R 54B .Rbuildignore 56B plot_factor.Rd 5KB plot_data_vs_cov.Rd 4KB plot_factors_vs_cov.Rd 4KB plot_weights.Rd 3KB plot_data_scatter.Rd 3KB plot_dimred.Rd 3KB run_enrichment.Rd 3KB plot_data_heatmap.Rd 3KB plot_factors.Rd 3KB get_default_mefisto_options.Rd 3KB get_default_training_options.Rd 3KB plot_weights_scatter.Rd 3KB run_umap.Rd 2KB plot_variance_explained.Rd 2KB get_data.Rd 2KB prepare_mofa.Rd 2KB calculate_contribution_scores.Rd 2KB impute.Rd 2KB get_default_model_options.Rd 2KB correlate_factors_with_covariates.Rd 2KB get_default_stochastic_options.Rd 2KB run_mofa.Rd 2KB plot_variance_explained_per_feature.Rd 2KB plot_top_weights.Rd 2KB get_expectations.Rd 2KB get_default_data_options.Rd 2KB load_model.Rd 2KB MOFA.Rd 2KB get_weights.Rd 2KB calculate_variance_explained.Rd 2KB create_mofa.Rd 2KB run_tsne.Rd 2KB cluster_samples.Rd 2KB plot_weights_heatmap.Rd 2KB predict.Rd 2KB get_factors.Rd 1KB plot_data_overview.Rd 1KB plot_factor_cor.Rd 1KB make_example_data.Rd 1KB plot_group_kernel.Rd 1KB get_variance_explained.Rd 1KB calculate_variance_explained_per_sample.Rd 1KB get_imputed_data.Rd 1KB set_covariates.Rd 1KB plot_enrichment_detailed.Rd 1KB interpolate_factors.Rd 1KB summarise_factors.Rd 1KB共 145 条
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