example-datasets:与RiboViz一起运行的示例数据集
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2021-03-26
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example-datasets-master.zip （74个子文件） 
example-datasets-master simulated mok contaminants 
Sc_rRNA_example.fa 170B
Sc_rRNA_example-fasta_provenance.txt 490B annotation Scer_YAL_5genes_w_250utrs.gff3 848B tiny_2genes_20utrs.fa 120B tiny_2genes_20utrs.gff3 307B Scer_YAL_5genes_w_250utrs.fa 11KB tiny_2genes_20utrs_annotation_provenance.txt 518B Scer_YAL_5genes_w_250utrs_annotation_provenance.txt 567B Mok-tinysim_config.yaml 3KB Mok-simYAL5_config.yaml 3KB README.md 773B LICENSE 11KB protista README.md 332B animalia README.md 169B plantae README.md 164B bacteria escherichia contaminants Escherichia_coli_K12_rrna_trna.fa 58KB Escherichia_coli_REL606_rrna_trna.fa 40KB Escherichia_coli_K12_rrna_trna_provenance.txt 621B annotations Escherichia_coli_REL606_CDS_w_25utrs.fa 4.13MB Escherichia_coli_asite_disp_length.txt 437B Escherichia_coli_K12_CDS_w_25utrs.gff3 733KB Escherichia_coli_K12_CDS_w_25utrs_annotation_provenance.txt 1KB Escherichia_coli_K12_CDS_w_25utrs.fa 4.11MB Escherichia_coli_REL606_CDS_w_25utrs.gff3 676KB Woolstenhulme_2015_3_prime_mapping_RPF_2-samples_CDS_w_25utrs.yaml 3KB Favate_etal_2021_ltee_translation_multiplexed_barcodes.tsv 109B Morgan_etal_2018_heat_stress_9-samples_CDS_w_25utrs.yaml 4KB Favate_etal_2021_ltee_translation_multiplexed_CDS_w_25utrs.yaml 3KB README.md 352B archaea haloferax contaminants Haloferax_volcanii_DS2_H98_rRNA_tRNA_provenance.txt 666B Haloferax_volcanii_DS2_H98_rRNA_tRNA.fasta 22KB annotations Haloferax_volcanii_DS2_H98_CDS_w_25utrs_annotation_provenance.txt 2KB Haloferax_volcanii_DS2_H98_CDS_w_25utrs.gff3 731KB Haloferax_volcanii_DS2_H98_CDS_w_25utrs.fa 3.51MB Haloferax_volcanii_asite_disp_length.txt 437B Gelsinger_etal_2020_FFC_MNase_samples_CDS_w_25utrs.yaml 4KB README.md 161B .gitignore 38B fungi neurospora contaminants Neurospora_crassa_NC12_rRNA_tRNA.fa 374KB Neurospora_crassa_NC12_rRNA_tRNA_provenance.txt 472B Yu_2015_Nc_CDSplus120_config.yaml 2KB annotation NC12_CDS_120bpL_120bpR.gff3 1.38MB NC12_CDS_with_120bputrs.fa 16.82MB NC12_CDS_with_120bputrs_provenance.txt 800B candida contaminants Candida_albicans_rRNA_tRNA_fasta_contaminants_provenance.txt 576B Candida_albicans_rRNA_tRNA.fa 78KB Muzzey_2014_RPF_3-samples_CDS_with_120utrs_config.yaml 2KB annotation Candida_albicans_CDS_with_120utrs.gff3 1004KB Candida_albicans_CDS_with_120utrs_annotation_provenance.txt 1KB Candida_albicans_CDS_with_120utrs.fa 10.27MB saccharomyces Gupta_2018_tRNA_Modification_Carbon_Nitrogen_Metabolism_RPF_9-samples_barcodes.tsv 128B Gupta_2018_tRNA_Modification_Carbon_Nitrogen_Metabolism_RPF_9-samples_CDS_w_250utrs_config.yaml 4KB contaminants Saccharomyces_cerevisiae_yeast_rRNA_R64-1-1.fa 15KB Saccharomyces_cerevisiae_yeast_rRNA_R64-1-1-fasta_provenance.txt 586B Brar_2012_Meiosis_RPF_6-samples_CDS_w_250utrs_config.yaml 4KB annotation Saccharomyces_cerevisiae_yeast_CDS_w_250utrs_annotation_provenance.txt 1KB Saccharomyces_cerevisiae_yeast_CDS_w_250utrs.fa 11.05MB Saccharomyces_cerevisiae_yeast_CDS_w_250utrs.gff3 885KB Lareau_2014_Replicates_RPF_3-samples_CDS_w_250utrs_config.yaml 4KB Weinberg_2016_RPF_1_sample_cerevisiae_CDS_w_250utrs_config.yaml 4KB README.md 851B cryptococcus Wallace_2020_JEC21_2-samples_10p_up12dwn9_CDS_120bpL_120bpR_config.yaml 4KB contaminants JEC21_rrna.fasta 5KB H99_rrna-fasta_provenance.txt 522B JEC21_rrna-fasta_provenance.txt 1KB H99_rrna.fasta 6KB annotation JEC21_10p_up12dwn9_CDS_120bpL_120bpR.gff3 967KB JEC21_10p_up12dwn9_CDS_with_120bputrs.fa 12.1MB H99_10p_up12dwn9_CDS_120bpL_120bpR.gff3 1.04MB H99_10p_up12dwn9_CDS_with_120bputrs.fa 12.17MB H99_10p_up12dwn9_CDS_with_120bputrs_provenance.txt 1KB JEC21_10p_up12dwn9_CDS_with_120bputrs_provenance.txt 1KB Wallace_2020_H99_4-samples_10p_up12dwn9_CDS_120bpL_120bpR_config.yaml 4KB README.md 8KB资源评论
