ExonFinder:提取新型盒式外显子/保留内含子的管道-开源
81 浏览量
2021-04-29
12:15:52
上传
评论
收藏 21.5MB GZ 举报
exonfinder_v2.0.tar.gz （72个子文件） 
Sample_files_description.txt 324B
sh_scripts 
Advanced_analysis.sh 3KB NE-Extractor.sh 4KB BlatToAnnotatedBlocks.sh 2KB Init_ENSTs.sh 5KB Init_Genome.sh 1KB CodingCheck.sh 6KB SplicingCheck.sh 6KB Basic_analysis.sh 2KB Merge_Results.sh 2KB BlocksToNovelExons.sh 2KB cDNA_check.sh 3KB AWKs CDS_transform_refined_2.awk 759B CDS_transform.awk 1KB splicing_checking_unedited_ACAT.awk 14KB ObtainIntronInRetain.awk 883B CDS_transform_refined_1.awk 313B BlatInitTransform.awk 2KB splicing_checking_unedited_AGGC.awk 14KB final_catlog_cds.awk 3KB UTR_overlap_check_2.awk 2KB DividingBlocks.awk 957B support_count.awk 3KB Init_ENST.awk 559B support_count_refine.awk 2KB splicing_checking_noncanonical.awk 19KB GapFix.awk 1020B rm_ambiguous_BLAT-blocks.awk 3KB support_count_coding.awk 2KB rm_duplicate_candidates.awk 262B splicing_checking_unedited_AGGT_3n.awk 11KB splicing_checking_unedited_AGGC_3n.awk 14KB RetainCut.awk 2KB final_layout.awk 537B UTR_overlap_check_1.awk 694B final_catlog_noncds.awk 2KB filter_internal_retained.awk 6KB splicing_checking_unedited_AGGT.awk 11KB merge_AllSpecies.awk 2KB GetENSTMaxLen.awk 321B rm_duplicate.awk 655B ReadMe.txt 6KB UNINSTALL.sh 352B C_PROGRAMS SOURCE ExonScan.c 16KB RecordDivide.c 2KB CatMapBlock.c 34KB ExtractSeqDNA.c 3KB cdnaCheck.c 6KB GenomeTransform.c 2KB extractSpliceSites.c 6KB AS_Exon_Removal.c 9KB extractCandidateDNA.c 7KB BlockCorrect.c 16KB BINARY AS_Exon_Removal 13KB extractSpliceSites 13KB extractCandidateDNA 18KB cdnaCheck 12KB ExonScan 18KB RecordDivide 9KB BlockCorrect 29KB CatMapBlock 45KB ExtractSeqDNA 13KB GenomeTransform 13KB SampleInputOutput Sample.genome 65.13MB Sample_files_description.txt 324B Sample.cdna 8KB SampleOutput.tsv 436B Sample.psl 17KB Sample.EST 5KB Sample.genes 8.32MB Sample.genes_CDS 4.7MB INSTALL.sh 680B资源评论
