savvy:与各种变体调用格式的接口
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2021-03-22
06:10:20
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savvy-master.zip （90个子文件） 
savvy-master dep 
htslib.cmake 2KB s1r_spec.md 4KB packaging-dockerfile-ubuntu16 210B .github workflows build_and_test.yml 694B
s1r_diagram.png 39KB include test test_class.hpp 2KB sav export.hpp 339B utility.hpp 862B filter.hpp 11KB index.hpp 335B merge.hpp 368B rehead.hpp 337B head.hpp 331B sort.hpp 5KB concat.hpp 337B import.hpp 380B stat.hpp 420B savvy dictionary.hpp 2KB armadillo_vector.hpp 1KB vcf_reader.hpp 51KB utility.hpp 10KB endianness.hpp 3KB csi.hpp 14KB sample_subset.hpp 797B writer.hpp 28KB ublas_vector.hpp 647B m3vcf_reader.hpp 18KB s1r.hpp 41KB file.hpp 4KB variant_iterator.hpp 2KB sav_reader.hpp 52KB allele_status.hpp 450B savvy.hpp 11KB pbwt.hpp 1KB typed_value.hpp 105KB data_format.hpp 1KB portable_endian.hpp 3KB variant_group_iterator.hpp 9KB sparse_vector.hpp 14KB site_info.hpp 54KB region.hpp 7KB varint.hpp 7KB reader.hpp 37KB compressed_vector.hpp 15KB sav1.hpp 4KB eigen3_vector.hpp 2KB m3vcf_spec.md 3KB LICENSE 16KB Doxyfile 112KB sav_spec_v2.md 6KB src eval main.cpp 19KB test linreg_ttest.cpp 37KB slr_examples.cpp 7KB savvy_speed_test.cpp 5KB test_class.cpp 2KB main.cpp 29KB tcdf.hpp 2KB sp_reg.cpp 25KB sav sav_sample_sort.cpp 3KB rehead.cpp 9KB merge.cpp 16KB import.cpp 20KB head.cpp 3KB utility.cpp 3KB sort.cpp 13KB index.cpp 8KB main.cpp 4KB concat.cpp 8KB export.cpp 36KB stat.cpp 16KB bcf2m3vcf.cpp 1KB savvy region.cpp 836B m3vcf_reader.cpp 11KB varint.cpp 3KB vcf_reader.cpp 12KB reader.cpp 4KB site_info.cpp 1KB utility.cpp 3KB sav_reader.cpp 11KB savvy.cpp 551B
requirements.txt 62B doc variant_group_iterator.md 2KB genotype_matrix.md 3KB .gitignore 266B CMakeLists.txt 8KB package-linux.sh 2KB test_file.vcf 5KB sav_spec.md 3KB README.md 6KB scripts compare-gt-compression.sh 1KB资源评论
