BamQC:映射的质量控制分析程序
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2021-05-18
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BamQC:映射的质量控制分析程序 （203个子文件） 
bamqc 14KB run_bamqc.bat 207B .gitignore 456B .gitignore 159B .gitignore 3B example_annot.gtf 8KB
1 Basic Statistics.html 4KB 4.1 BamQC Preferences.html 3KB header_template.html 3KB 2.2 Opening a Sequence File.html 2KB 5.1 Common Problems.html 2KB 2.1.1 Selecting a Genome.html 1KB 2.1 Setting an Annotation.html 1KB 5.2 Reporting Bugs.html 1KB 1.1 What is BamQC.html 1KB 2.4 Saving a Report.html 1KB 2.3 Evaluating Results.html 1KB 2 Genome Coverage.html 1KB 9 Mapping Quality Distribution.html 870B 3 Chromosome Read Density.html 833B 10 Insert Length Distribution.html 777B 4 Feature Coverage.html 745B 8 SNP Frequencies by Type.html 726B 6 Indel Frequencies.html 713B 2.1.2 Importing Annotation from GFF or GTF Files.html 710B 7 SNP Frequencies.html 686B 5 Soft Clip Length Distributions.html 629B bamqc_icon.ico 2KB
commons-math3-3.5.jar 1.94MB sam-1.103.jar 630KB log4j-1.2.16.jar 470KB commons-lang3-3.4.jar 424KB junit-4.11.jar 239KB jbzip2-0.9.1.jar 53KB hamcrest-core-1.3.jar 44KB Base64.java 85KB CigarMDGenerator.java 35KB VariantCallDetection.java 29KB BamQCApplication.java 17KB BamQCPreferences.java 17KB VariantCallDetectionTest.java 17KB ScatterGraph.java 15KB GenomeParser.java 15KB BasicStatistics.java 13KB LineWithHorizontalBarGraph.java 13KB HTMLReportArchive.java 12KB GFF3AnnotationParser.java 12KB GTFAnnotationParser.java 11KB GenomeCoverage.java 11KB IndelFrequencies.java 10KB AnalysisRunner.java 9KB LineGraph.java 9KB BamQCMenuBar.java 9KB SeparateLineGraph.java 9KB BamQCListGenomes.java 9KB SNPFrequencies.java 8KB GenomeDownloader.java 8KB BamQCConfig.java 8KB EditPreferencesDialog.java 8KB CompactScatterGraph.java 8KB BarGraph.java 8KB GenomeSelector.java 8KB SNPFrequenciesByType.java 8KB OfflineRunner.java 8KB StackedHorizontalBarGraph.java 7KB InsertLengthDistribution.java 7KB QualityBoxPlot.java 7KB ChromosomeReadDensity.java 7KB HorizontalBarGraph.java 7KB RpkmReference.java 7KB ResultsPanel.java 7KB FormatNumber.java 7KB Location.java 6KB BamQCTitlePanel.java 6KB SoftClipDistribution.java 6KB DownloadableGenomeSet.java 6KB ModuleConfig.java 6KB GenomeDownloadSelector.java 6KB SplitLocation.java 5KB BaseGroup.java 5KB CigarMD.java 5KB FeatureSubclass.java 5KB InsertLengthDistributionTest.java 5KB ProtoFeature.java 5KB MappingQualityDistribution.java 5KB FeatureCoverageTest.java 5KB UpdateChecker.java 5KB HelpSearchPanel.java 5KB TileGraph.java 5KB LinearRegression.java 5KB AnnotationParser.java 5KB BAMFile.java 5KB ChromosomeDensityTest.java 5KB HotColdColourGradient.java 5KB SimpleStats.java 5KB BasicStatisticsTest.java 4KB FeatureCoverage.java 4KB HelpIndexRoot.java 4KB CalculateDistribution.java 4KB Chromosome.java 4KB共 203 条
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