proteomicsTumorDeconv：一套用于评估指标以比较基于蛋白质的肿瘤反卷积算法功效的科学工作流程
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2021-02-16
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proteomicsTumorDeconv-main.zip （92个子文件） 
proteomicsTumorDeconv-main mRNAData 
Dockerfile 203B mrna-data-cwl-tool.cwl 658B tests unit_tests.py 0B queryGDC.py 5KB mRNADataSetsCLI.py 2KB README.md 2KB getAllDatasets.py 185B
arch.png 58KB perfEval figures Dockerfile 183B plot-figs.cwl 612B combine_results.R 3KB combinedCellTypeCorrelationTab.tsv 13KB prot-deconv.cwl 2KB scatter-test.yml 252B cibersort-bug.yml 203B mrna-deconv.cwl 2KB README.md 1KB scatter-test.cwl 2KB correlations Dockerfile 231B correlationXcelltypes.py 2KB correlation.py 2KB deconv-corrXcelltypes-cwl-tool.cwl 1KB deconv-corr-cwl-tool.cwl 1KB call-deconv-and-cor.cwl 2KB LICENSE 1KB protData prot-data-cwl-tool.cwl 663B protDataSetsCLI.py 2KB Dockerfile 235B pdc queryPDCfiles.py 8KB Dockerfile 220B slim_file.tsv 1.87MB file.tsv 20.35MB README.md 3KB getAllDatasets.py 185B tumorDeconvAlgs deconrnaseq Dockerfile 1013B cibersortx run-cibersortx-tool.cwl 2KB mcpcounter mcpcounter.r 2KB run-mcpcounter-tool.cwl 843B Dockerfile 1KB cibersort run-cibersort-tool.cwl 862B Dockerfile 931B cibersort.r 8KB xcell Dockerfile 949B run-xcell-tool.cwl 838B xcell.r 2KB epic run-epic-tool.cwl 839B Dockerfile 950B epic.r 2KB imputation imputation-tool.cwl 547B imputation-input.yml 70B DreamAI.R 1KB Dockerfile 1KB test-data.csv 25KB NULL 48B README.md 1KB .gitignore 4KB signature_matrices 
PBMC.txt 198KB LM22.txt 143KB LM7c.txt 100KB LM9.txt 60KB .circleci config.yml 2KB README.md 4KB index.md 23B manuscript content images 
orcid.svg 686B twitter.svg 1008B github.svg 1KB fig0_overview.afdesign 17KB metadata.yaml 603B 02.introduction.md 186B 00.front-matter.md 2KB 90.back-matter.md 103B 05.discussion.md 146B 04.methods.md 551B 03.results.md 875B manual-references.json 370B 01.abstract.md 1008B SETUP.md 15KB .github workflows manubot.yaml 2KB ci install-spellcheck.sh 419B deploy.sh 3KB .gitignore 110B README.md 441B output README.md 1KB USAGE.md 20KB LICENSE.md 17KB .gitignore 560B webpage images 15B
index.html 19B
manuscript.pdf 23B README.md 2KB README.md 6KB LICENSE-CC0.md 7KB资源评论
