sgkit:统计遗传学工具包
需积分: 9 119 浏览量
2021-03-16
17:41:20
上传
评论
收藏 20.2MB ZIP 举报
sgkit:统计遗传学工具包 （197个子文件） 
CEUTrio.20.21.gatk3.4.g.bcf 334KB plink_sim_10s_100v_10pmiss.bed 303B example.bgen 650KB example-separate-samples.bgen 17KB example-no-samples.bgen 17KB CEUTrio.20.21.gatk3.4.g.vcf.bgz 317KB CEUTrio.20.21.gatk3.4.noindex.g.vcf.bgz 317KB CEUTrio.20.21.gatk3.4.csi.g.vcf.bgz 317KB CEUTrio.21.gatk3.4.g.vcf.bgz 247KB CEUTrio.20.gatk3.4.g.vcf.bgz 74KB plink_sim_10s_100v_10pmiss.bim 3KB chwe.c 3KB setup.cfg 4KB .coveragerc 31B CEUTrio.20.21.gatk3.4.csi.g.vcf.bgz.csi 194B CEUTrio.20.21.gatk3.4.g.bcf.csi 170B gwas.csv 101KB gwas.csv 20KB beta_variant.csv 17KB sim_01.csv 7KB sim_01.csv 7KB beta_variant.csv 6KB predictions.csv 5KB traits.csv 5KB covariates.csv 3KB covariates.csv 3KB predictions.csv 1KB traits.csv 1KB beta_covariate.csv 184B beta_covariate.csv 54B Dockerfile 2KB Dockerfile 954B plink_sim_10s_100v_10pmiss.fam 150B .gitignore 2KB .gitignore 27B .gitignore 16B .gitignore 9B
1000G.phase3.broad.withGenotypes.chr20.10100000.vcf.gz 13.19MB NA12878.prod.chr20snippet.g.vcf.gz 3.71MB reduced_blocks_flat.csv.gz 586KB reduced_blocks_flat.csv.gz 20KB sample.vcf.gz 954B mixed.vcf.gz 403B MANIFEST.in 129B logging.ini 331B logging.ini 331B hwe_unit_test.ipynb 93KB unit_test_dev.ipynb 17KB
data-structures-xarray.jpg 83KB asv.conf.json 7KB LICENSE 11KB Makefile 698B Makefile 148B README.md 2KB README.md 1KB README.md 1KB README.md 996B README.md 874B CONTRIBUTING.md 211B chwe.o 3KB
mydask.png 53KB order.png 40KB sgkit_white_trnsprnt.png 8KB regenie.py 34KB popgen.py 29KB vcf_reader.py 28KB aggregation.py 24KB test_vcf_reader.py 24KB variables.py 23KB bgen_reader.py 22KB test_popgen.py 18KB test_regenie.py 16KB vcfzarr_reader.py 15KB pca.py 13KB glow_wgr.py 12KB plink_reader.py 11KB test_aggregation.py 11KB test_pca.py 11KB test_bgen_reader.py 11KB utils.py 11KB association.py 9KB test_association.py 8KB pc_relate.py 7KB test_utils.py 7KB window.py 7KB vcf_partition.py 7KB test_pc_relate.py 7KB hwe.py 7KB display.py 7KB utils.py 7KB test_display.py 7KB hail_sim.py 6KB api.py 6KB test_vcfzarr_reader.py 6KB test_window.py 6KB preprocessing.py 6KB test_hwe.py 6KB test_preprocessing.py 6KB test_distance.py 6KB model.py 5KB共 197 条
- 1
- 2
资源评论
胡轶强
- 粉丝: 18
- 资源: 4572
