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PyChunkedGraph:在Python中用于人工校对的块状图结构
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2021-04-04
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PyChunkedGraph PyChunkedGraph是为FlyWire和其他校对平台提供支持的校对和分段数据管理后端。 它建立在超级体素的初始聚集上,并有助于许多用户快速且并行地编辑聚集图中连接的组件。 使用PyChunkedGraph ChunkedGraph建立在Google Cloud BigTable上。 要使用此ChunkedGraph实现,需要一个BigTable实例。 摄取 /ingest提供了摄取脚本的示例。 提取管道设计为使用seunglab的集聚管道的输出,但可以进行调整以使用替代数据源。 部署/导入 PyChunkedGraph可以本地部署( run_dev.py ),以python脚本from pychunkedgraph.backend import chunkedgraph ( from pychunkedgraph.backend import ch
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