PyPI 官网下载 | mg-toolkit-0.2.5.tar.gz

[](https://travis-ci.org/EBI-Metagenomics/emg-toolkit) [](https://badge.fury.io/py/mg-toolkit) [](http://pepy.tech/project/mg-toolkit) Metagenomics toolkit enables scientists to download all of the sample metadata for a given study or sequence to a single csv file. Install metagenomics toolkit ============================ pip install -U mg-toolkit Usage ===== $ mg-toolkit -h usage: mg-toolkit [-h] [-V] [-d] {original_metadata,sequence_search} ... Metagenomics toolkit -------------------- positional arguments: {original_metadata,sequence_search} original_metadata Download original metadata sequence_search Search non-redundant protein database using HMMER optional arguments: -h, --help show this help message and exit -V, --version print version information -d, --debug print debugging information Examples ======== Download metadata:: $ mg-toolkit original_metadata -a ERP001736 Search non-redundant protein database using HMMER and fetch metadata $ mg-toolkit sequence_search -seq test.fasta -db full Databases: - full - Full length sequences (default) - all - All sequences - partial - Partial sequences