Course Objectives
This course will provide an in-depth analysis of the origin of the extra-ordinary sensitivity, fundamental limits, and operating principles of modern nanobiosensors. The primary focus will be the physics of biomolecule detection in terms of three elementary concepts: response time, sensitivity, and selectivity. And, we will use potentiometric, amperometric, and cantilever-based mass sensors to illustrate the application of these concepts to specific sensor technologies. Students of this course will not learn how to fabricate a sensor, but will be able to decide what sensor to make, appreciate their design principles, interpret measured results, and spot emerging research trends.
Who Should Take the Course
Engineers, chemists, physicists, technology developers, and product managers who have an interest in the emerging field of nanobiosensing.
Prerequisites
Freshman/sophomore level preparation in physics, chemistry, biology, and mathematics.
Course Outline
Unit 1: Introduction to Nanobiosensors/ Settling Time
L1.1: What are Nanobiosensors, Anyway?
L1.2: Basic Concepts: Biomolecules, Analyte Density, Diffusion Distances
L1.3: Basic Concepts: Types of Biosensors, Geometry of Biosensing
L2.1: Shape of a Surface
L2.2: Classical Sensors I
L2.3: Classical Sensors II
Unit 2: Setting Time
L2.4: Sensors with Complex Geometry
L2.5: Beating the Limits – Barcode Sensors
L2.6: Beating the Limits – Droplet Evaporation
L2.7: Beating the Diffusion Limit – Enhanced Diffusion and Fluid Flow
L2.8: First Passage and Narrow Escape Time I
L2.9: First Passage and Narrow Escape Time II
Unit 3: Sensitivity
L3.1: Nanobiosensors Sensitivity and Types of Biosensors
L3.2: Potentiometric Sensors: Charge Screening for a Planar Sensor
L3.3: Potentiometric Sensors: Charge Screening for Cylindrical Sensors
L3.4: Potentiometric Sensors: ISFET as a pH-Meter
L3.5: Potentiometric Sensors: Why are Biomolecules Charged?
L3.6: How to Beat Screening
Unit 4: Selectivity
L3.7: Amperometric Sensors – Glucose Sensor I
L3.8: Amperometric Sensors: Glucose Sensors II
L3.9: Amperometric Sensors: Beating the Diffusion Limit by Nanogap Amperometry
L3.10: Cantilever-based Sensors: BasicOperation
L3.11: Cantilever-based Sensors: Static Response
L3.12: Cantilever-based Sensors: Nonlinear Sensing – Flexure FET
Unit 5: Putting the Pieces Together
L4.1: Introduction and Molecular Recognition
L4.2: Physics of Sequential Adsorption
L4.3: When all else fails, tag, filer and amplify
L4.4: Noise Tranducers
L5.1: Genome Sequencer I
L5.2: Genome Sequencer II
L5.3: Genome Sequencer III
L5.4: Concluding Thoughts