VMTK Tutorials
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2013-03-12
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Tutorials
These are a bunch of tutorials on the use of vmtk. The first group is about the
infrastructure, the second about the functionality. You should really read the first
two infrastructure tutorials before moving on to the functionality tutorials.
Infrastructure
Vmtk Scripts - learn how to run vmtk scripts
Using Pypepad - learn how to use Pypepad
Basic PypeS Tutorial - learn how to effectively pipe vmtk scripts together
Use PypeS Programmatically - learn how to interactively work with PypeS
objects
Advanced PypeS Tutorial - learn how to write your own PypeS modules
Functionality
Getting Started - learn how to get your original dataset to work into vmtk
and set it up for further processing
Level Set Segmentation - learn how to reconstruct the 3D surface of a
vascular segment from CT or MR images using level sets
Computing Centerlines - learn how to compute centerlines of a vascular
segment
Preparing a Surface for Meshing - learn how to prepare a surface for mesh
generation
Generating a Mesh - learn how to generate a mesh from a surface
Meshing the Netgen Way - learn an alternative way of meshing with
Netgen
Branch Splitting - learn how to split a branching vessel into its constituent
branches
Geometric analysis - learn how to analyze the 3D geometry of a vascular
segment
Mapping and patching - learn how to map the surface of a population of
vessels onto the same parametric space and enable statistical analyses of
surface-based quantities
Applications
Cerebral aneurysms
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