粗糙集软件ROSETTA和ROSE2及中文使用说明资源-CSDN文库

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ROSE

ROSETTA

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rosetta.zip （96个子文件）

rosetta

中文使用指南.pdf 236KB

The command-line version of HYPOCLASS.txt 11KB

ROSETTA.EXE 1.81MB

ROSE2

isf2tab.exe 248KB

reducts.exe 268KB

simrs.exe 368KB

gdisgen.exe 268KB

SIR2ISF.EXE 39KB

complete.exe 256KB

simrel.exe 372KB

ldisgen.exe 260KB

IsfEdit.exe 672KB

isfedit.exe.manifest 642B

isf2kod.exe 264KB

ros2isf.exe 163KB

deer.exe 272KB

manual

manual.pdf 651KB

explore.exe 388KB

Rose2.exe 2.06MB

xdiscret.exe 288KB

selgen.exe 352KB

kod2isf.exe 104KB

manual.exe.manifest 640B

unins000.dat 6KB

core.exe 252KB

simlem.exe 384KB

manual.exe 410KB

examples

Bupa.isf 8KB

Bre285.isf 8KB

wars3.isf 373B

n_irys.isf 3KB

HSV122a.isf 10KB

nbuses.isf 3KB

zoo.isf 4KB

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fin.isf 2KB

FORG.ISF 4KB

UROLOG.ISF 54KB

ms.isf 21KB

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PIMA.ISF 24KB

vowel.isf 66KB

Wzw.isf 24KB

N_bank.isf 3KB

ecoli.isf 13KB

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Hayes.isf 2KB

meta.isf 83KB

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Mashroom.isf 527KB

SEGMENTA.ISF 34KB

cancer.ISF 114KB

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soybean-large.isf 40KB

manual.isf 572B

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primary.isf 13KB

cars.isf 21KB

URAZY.ISF 4KB

ACLP.ISF 3KB

yeast.isf 63KB

unins000.exe 75KB

atoms.exe 252KB

isf2nni.exe 248KB

rose2.exe.manifest 638B

redgen.exe 292KB

fdiv.exe 244KB

lem.exe 352KB

classify.exe 308KB

rosettasoftware.zip 1.79MB

An example pipeline.txt 4KB

manual.pdf 693KB

rosetta.txt 1KB

简介.doc 26KB

ROSETTA Technical Reference Manual

∗

Aleksander Øhrn

†

Contents

1 Introduction 3

2 GUI Preliminaries 4

3 Projects 4

3.1 IODBC... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5

3.2 IReport . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6

3.2.1 IReportIXML format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6

3.2.2

IReportIHTML format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6

3.3 IAnnotations... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6

4 Decision Tables 7

4.1 Dictionaries . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7

4.2 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8

4.3 IDictionary . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9

4.3.1 IDictionaryIExport... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9

4.3.2 IDictionaryIImport... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9

4.4 IExport . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9

4.4.1 IExportIXML format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9

4.4.2 IExportIProlog format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10

4.4.3 IExportIMatlab format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10

4.4.4 IExportIPlain format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11

4.4.5 IExportIIndiscernibility graph... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11

4.4.6 IExportIDiscernibility functions... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13

4.5 IComplete . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14

4.5.1 ICompleteIRemove incompletes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14

4.5.2 ICompleteIMean/mode ﬁll . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14

4.5.3 ICompleteIConditioned mean/mode ﬁll . . . . . . . . . . . . . . . . . . . . . . . . . 15

4.5.4 ICompleteICombinatorial completion . . . . . . . . . . . . . . . . . . . . . . . . . . 15

4.5.5 ICompleteIConditioned combinatorial completion . . . . . . . . . . . . . . . . . . . 15

4.6 IDiscretize . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16

4.6.1 IDiscretizeIBoolean reasoning algorithm... . . . . . . . . . . . . . . . . . . . . . . . 16

4.6.2 IDiscretizeIManual discretization... . . . . . . . . . . . . . . . . . . . . . . . . . . . 17

4.6.3 IDiscretizeIEntropy/MDL algorithm... . . . . . . . . . . . . . . . . . . . . . . . . . . 18

4.6.4

IDiscretizeIEqual frequency binning... . . . . . . . . . . . . . . . . . . . . . . . . . . 18

4.6.5 IDiscretizeINaive algorithm... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19

4.6.6 IDiscretizeISemi-naive algorithm... . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20

4.6.7 IDiscretizeIFrom ﬁle with cuts... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20

4.6.8 IDiscretizeIBoolean reasoning algorithm (RSES)... . . . . . . . . . . . . . . . . . . 21

4.6.9 IDiscretizeIFrom ﬁle with cuts (RSES)... . . . . . . . . . . . . . . . . . . . . . . . . 21

4.7 IReduce . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 21

4.7.1 IReduceIGenetic algorithm... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22

∗

This document is under perpetual development. Last updated May 25, 2001.

†

Department of Computer and Information Science, Norwegian University of Science and Technology, Trondheim, Norway. E-mail:

aleks@idi.ntnu.no.

4.7.2 IReduceIJohnson’s algorithm... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 24

4.7.3 IReduceIHolte’s 1R . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26

4.7.4 IReduceIManual reducer... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26

4.7.5 IReduceIDynamic reducts (RSES)... . . . . . . . . . . . . . . . . . . . . . . . . . . . 27

4.7.6 IReduceIExhaustive calculation (RSES)... . . . . . . . . . . . . . . . . . . . . . . . 27

4.7.7 IReduceIJohnson’s algorithm (RSES)... . . . . . . . . . . . . . . . . . . . . . . . . . 28

4.7.8 IReduceIGenetic algorithm (RSES)... . . . . . . . . . . . . . . . . . . . . . . . . . . 28

4.8 IClassify... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 29

4.9 IOther . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 30

4.9.1 IOtherIImport reducts... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 30

4.9.2 IOtherISplit in two... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31

4.9.3 IOtherIPartition... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31

4.9.4 IOtherIApproximate decision class... . . . . . . . . . . . . . . . . . . . . . . . . . . . 32

4.10 IExecute . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 32

4.10.1 IExecuteIPipeline script... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 32

4.10.2 IExecuteIPipeline script with CV... . . . . . . . . . . . . . . . . . . . . . . . . . . . 33

4.10.3

IExecuteIBatch script... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 34

4.11 IStatistics... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 35

5 Decision Tables 36

5.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36

6 Reducts 36

6.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36

6.2 IExport . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 37

6.2.1 IExportIXML format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 37

6.2.2 IExportIProlog format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 37

6.2.3 IExportIPlain format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 38

6.3 IFilter . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 38

6.3.1 IFilterIBasic ﬁltering... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 38

6.3.2 IFilterICost ﬁltering... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 38

6.3.3 IFilterIPerformance ﬁltering... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39

6.3.4 IFilterIRemove reducts with no rules (RSES) . . . . . . . . . . . . . . . . . . . . . 41

6.3.5 IFilterIBasic shortening... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41

6.4 IGenerate rules... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41

6.5 IStatistics... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 42

7 Rules 42

7.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43

7.2 IExport . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43

7.2.1 IExportIXML format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43

7.2.2 IExportIProlog format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43

7.2.3 IExportIC++ format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 44

7.2.4 IExportIPlain format... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45

7.3 IFilter . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45

7.3.1 IFilterIBasic ﬁltering... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45

7.3.2 IFilterIQuality ﬁltering... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47

7.3.3 IFilterIQuality ﬁltering loop... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47

7.4 IStatistics... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 48

8 Patterns 49

8.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49

9 Batch Classiﬁcations 49

9.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49

10 Text Files 50

10.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50

11 Partitions 50

11.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50

12 Approximations 50

12.1 IView... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50

12.2 IStatistics... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50

13 Algorithms 51

13.1 IApply... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 51

14 Classiﬁer Algorithms 51

14.1 Standard voting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 52

14.2 Voting with object tracking . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 54

14.3 Naive Bayes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 54

14.4 Standard/tuned voting (RSES) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 55

15 Script Algorithms 56

15.1 Loader . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 56

15.2 Saver . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57

15.3 StructureCreator . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57

15.4 Kidnapper . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57

A Import File Formats 57

A.1 Dictionaries . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57

A.2 Decision Tables . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 58

A.2.1 Plain format . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 59

A.2.2 POS format . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 60

A.2.3 RSES format (RSES) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 60

A.3 Reducts . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61

A.4 Command Scripts . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61

A.5 IDG Information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 62

A.6 Attribute Cost Information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 64

A.7 RSES Distance Matrices . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 64

A.8 Pairs Files . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 64

B Command-Line Versions 65

B.1 CLROSETTA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 65

B.2 CLHYPOCLASS . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66

Preface

This document is the technical reference manual for ROSETTA [26, 27, 28, 29], a software system I designed

and implemented as part of my doctoral dissertation [26]. As with all manuals, it almost certainly contains

errors and has plenty of room for improvements. Please report any errors, typos, inconsistencies, omissions

and suggestions for improvements to aleks@idi.ntnu.no.

The RSES library [38], developed at the Group of Logic at the University of Warsaw [17], is embedded as

an optional component of the ROSETTA computational kernel. The names of these algorithms are in this

document all preﬁxed with the string “RSES”.

1 Introduction

This document constitutes the technical reference manual for the ROSETTA software system. The main al-

gorithms and their options are brieﬂy described, and appropriate references are given to the literature where

relevant.

This document should not be read in isolation. The reader is referred to Øhrn [26, chapters 4–7] and references

therein for an overview of the background theory, as the same terminology and notation is employed in this

manual. Furthermore, it is assumed that the reader has a basic familiarity with the knowledge discovery

and data mining process, and how a typical empirical modelling project is carried out. A small example

ROSETTA case study can be found in [26, chapter 9], outlining how ROSETTA can be used to, e.g., induce

and validate classiﬁcation rules from a database.

Miscellaneous tips and take-home points are throughout this document indented and marked with a special

symbol. An example is the following:

TIP

News, tips, software updates and other relevant information can be found at the ROSETTA website [35].

To obtain source code of portions of the ROSETTA computational kernel, consult the ROSETTA C++

Library website [36].

Information under the Name, Keywords and Signature labels in this document are mostly relevant in the

context of command scripts. Command scripts are described in Section 4.10 and Appendix A.4.

In the ROSETTA GUI, many of the same menu entries appear for different types of objects. For example, all

objects have an Annotations... entry in their pop-up menus. Such multiply occurring entries are only listed

once in this document. Also, not all menu entries are documented here, only the less self-explanatory ones.

2 GUI Preliminaries

An overview of the ROSETTA GUI is given by Øhrn [26, chapter 8]. The following ROSETTA GUI details are

worth noting:

• A decision system can be read into a new ROSETTA project by selecting Open... from the main File

menu, and will be placed immediately below the root of the Structures node in the project tree.

• Branches in the project tree can be expanded or collapsed by left-clicking on the “” or “” symbols

next to the icons.

• Right-clicking on an icon in the project tree brings up a pop-up menu for that object. In the following,

the symbol “I” will be used to denote menu navigation.

• Left-clicking twice on an icon in the project tree can be used as a shortcut for viewing that object in

detail.

• Grayed columns in views of decision systems indicate that the corresponding attributes are “masked

away” and subsequently ignored by the ROSETTA kernel in any analysis steps. Missing values are

indicated by the string Undeﬁned.

• Rules can be sorted directly in their views by right-clicking the column to sort by.

• To rename an object, ﬁrst left-click once on its icon to select it. Then left-click once more on the icon’s

label. The icon’s label is edited directly in place.

• To view progress messages and warnings, select Messages from the main View menu. A document has

to be present before the View menu appears.

3 Projects

Name: Project

Description: A project object is the top-level structural object in a project tree. A root project cannot be

deleted from the GUI. It is possible for a project to have subprojects.

Figure 1: Dialog box for ODBC import of decision tables.

Figure 2: Dialog box for specifying attribute types.

3.1 IODBC...

Name: ODBCDecisionTableImporter

Description: Allows tabular data to be imported from a wide variety of data sources such as spreadsheets

or relational databases, by means of ODBC.

Which data sources that are available depends

on which ODBC drivers that are installed on your system.

TIP

ODBC drivers for most popular database management systems are freely available on

the Internet.

Dialogs: Figure 1, Figure 2.

Keywords: FILENAME (String).

Signature: DecisionTable → DecisionTable

Open Database Connectivity. ODBC is an open, vendor-neutral interface for database connectivity that provides access to a wide

variety of computer systems. The ODBC programming interface enables applications to access data in database management systems

(DBMSs) that use SQL as a data access standard. This enables developers to not have to target a speciﬁc DBMS. Instead, users can add

modules called database drivers that link the application to their choice of DBMS.

评论收藏

内容反馈

zhoujy51

2012-11-09

使用说明还是简单了点
yinziming

2013-05-13

已经是网上能找到这两个软件的最全的信息了。rose2只有英文手册。rosetta的中文说明是刘盾博士写的，还是太过简单了。
yanchunmiao

2013-05-31

rose2只有英文，看着有点困难
wimar327

2014-10-23

手册很全面，对于掌握软件帮助很大！
wangtaiping2012

2013-06-30

win7 用着不得劲儿啊