pipeline:用于运行feildae批注和对齐的管道的代码和文档
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2021-05-23
10:04:18
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pipeline-master.zip （49个子文件） 
pipeline-master etc 
pipeline.config 103B rearrangements.test.config 402B pipeline.gc.config 103B pipeline.coverage.config 385B cactus.test.config 90B pipeline.ncrna.config 130B pipeline.cactus.config 94B chaining.config 352B README.md 99B bin blocks_to_bed.py 4KB hal_to_net_one_chromosome 1KB generate_input_grimm_synt 5KB sizes_to_karyotype.py 946B chain_one_chromosome 3KB cluster_utils.py 2KB calc_alignment_coverage_runner.py 2KB count_anchors_density.py 2KB extract_full_identity.py 1KB gc_track_wrapper.py 1KB cactus_runner.py 697B parse_grimm_output.py 17KB rearrangements_wrapper 1KB chain_genome 2KB grimm_output_to_bed.py 182B hal_lift_genome 1KB calc_alignment_coverage_wrapper.py 1KB utils.py 1KB ncrna_track_wrapper.py 1KB filter_synteny_blocks.py 4KB ncrna_track_runner.py 4KB pslTransMap 1KB count_nucls_in_bed.sh 198B cactus_wrapper 1KB hal_lift_one_chromosome 2KB draw_plot_for_length_distr.py 2KB generate_input_grimm.py 7KB generate_circos_input.py 2KB gc_track_runner.py 2KB calc_alignment_coverage_runner.pyc 2KB draw_plot_for_coverage.py 3KB transmap_wrapper 1KB rearrangements_runner.py 3KB doc 
todo.txt 447B bin pdfFontChk 481B design Makefile 1020B felidae-pipeline-design.ltx 6KB report_current_gene_annotations_prep.md 5KB cat_human_exons_distr.md 850B pancat-build-record.1.md 3KB资源评论
