matlab求平均值的代码男-DTI:SBDTI管道

matlab求求的代码男贸工部 SB DTI 管道 预处理 创建 DTI 文件夹并将 dicoms 转换为 NIfti # use foreach n (SB002_fu2 SB018_fu2 SB019_fu2…) from line 3 of subjects (all subjects) cd /danl/SB/ ${n} /anatomical/PING_30DIR_LONGTR_4/ if ( ! -d DTI) then mkdir DTI/ dcm2nii -o ./DTI -r N DICOM for i in $( ls ) ; do dcm2nii -p y -f y ${i} / * ; done ; 大脑提取 - 提取 b0 创建掩码 fslroi * .nii.gz ${n} _b0_AP 0 1 bet ${n} _b0_AP ${n} _brain -m -f 0.3 # cannot run topup becuase only 1 b0 image 运行涡流 # IF not running on cluster - I did not do thi