Genedoc免费版

2.3 * Fixed Configuration Variables not being initialized properly. * Added DNA Ambiguity code. * Fixed input sequences detecting gap chars. * Possible fix of input sequences duplicating data. * Added DNA group set analysis display. * Fixed Contrast mode to not include zero level scores. * Fixed GeneDoc .msf header reader to be forward compatable. * Fixed rebase file read for larger patterns. * Added Rebase Search Filters. * Added user configurable rebase shading overlap color. * Added export of search list to rebase readable file. * Added reporting of duplicate sequence names. * Added Display/No Display of individual Physiochemical properties. * Fixed bug ReBase patterns found twice if following a gap char. * Added Rebase cut sites/fragment length/unique fragment/unique frags per group report. * Added Plot of unique fragment lengths. * Added Display of reports that can handle any size files. * Added print function to reports. * Added ability to print shading only. * Added Identity Display Mode. * Fixed Changing project type setting properties and score tables. * Fixed change gap char for alignment code. * Fixed RasMol script to not blank display when no sidechains selected. * Added Shade backbone only and sidechain only to rasmol script. * Added Sequence Start Position attribute. * Added Ident All or Ident conserved styles to Ident Display Mode. * Fixed Structure Shading changing when have both Non-Group and Groups structure info loaded. * Added PDB Read routines for structure shading. 2.2 * Fixed 'Clear all Gap Columns' Function. * Added AutoJustify of Max Name Length and Max Position Indicator Length. * Added Max Name Length Displayed Field. * Added User Configured Name/Sequence Block seperation string. * Added User Configured Seq Loc Ind/Sequence Block seperation string. * Added Phylip File Import function. * Fixed program hanging when doing File/New, File/Import, and then a caret positioning function. * Fixed program crashing when deleting all sequences. * Added UnOfficial CrossHatch pattern support for background shading. * Added ability to select Sequences to be exported. * Changed the GeneDoc information section of the .MSF file. *** NOTE: This new header can NOT be read by previous versions of GeneDoc * Added ProSite/ReBase Search Results mode. * Added Auto-Load Search Lists with ProSite or ReBase files. List gets loaded with matches found in the ProSite or Rebase Files. * Fixed the Copy to New Project function in many cases, most having to do with group information being copied. * Changed Structure Sequence Matching rountine to work for both overlap and within cases. * Added HTML output. * Added RasMol coloring script output. * Added Weights in Phylogenetic tree parsing. * Fixed page up bug. * Fixed Pict files sequence names not being group colored. * Relaxed .MSF input routine, does not need spaces every 10 in data rows. * Fixed import routines to get last char if no last CR/LF. * Added RasMol SideChain display options to coloring script output. * Changed Duplicate Sequence Names To Complain and Notify, but not abort. * Changed Group Names in Group Sequence Dialog to be colored with group colors. * Changed Fasta input to limit names to length of 20. * Added conserved shading of substitution groups styles. * Fixed extra CR/LF being added to comments in file with each additional file save. 2.1 * Added Configurable Marker Line above Consensus Line to show column position. * Added Configurable Gap Indicator For Consensus Line. * Added Import and Export of additional file types: Phylip, PIR, Clustal ALN, Fasta. * Added a function to clear Columns that are All gaps. * Rewrote fasta import sequence routine. * Fixed bug in filler block at end in Print in Landscape mode. * Fixed bug where stat file tests of residue identity and score was case sensitive. * Added residue display in upper, lower, or as_is case. * Added sequence reverse and DNA compliment functions. * Added (and fixed) manual input and clipboard paste of sequence data. * A Bunch of Fixes to the DStat Display. * Added C.D.F. plot of Statistics Scores for Alignment and Groups. * Fixed Bug of DNA/RNA Project type being switched. * Added Status Line Sequence Location Indicator. * Added File Import Type Selection Dialog for import of *.* * Added PhysioChemical Properties Group Shading Display(s). * Added Sequence String Substitution Function. * Added Sequence Duplicate Function. * Added Sequence Block Copy of Data Function. * Added Copy Sequence to Clipboard Function. * Added PhysioChemical Shading Mode(s). * Fixed Phylogenetic tree import function. * Changed Phylogenetic tree name parsing slightly. * Fixed a rescore phyogenetic tree score bug. * Added Conserved Group With Cross Shading display. * Updated and Fixed help file. 2.0.4: * Fixed new Project wont reopen bug. * changed .msf file open code to be much faster. * fixed a global free invalid handle in import fasta bug. * added support for up to 50 char sequence names. * better detection and error message for duplicate sequence names. * duplicate sequences skipped on file imports. * User Defined structure shading now overrides built in structure shading when already defined. * fixed handling of '!' in residue field in dssp files. 2.0.1: Fixed input fasta bug. Version 2.0: What didn't change?