INSTRUCTIONS FOR INSTALLING drEEM 0.1.0
The toolbox was published in conjuction with the following reference:
% Murphy K.R., Stedmon C.A., Graeber D. and R. Bro, Fluorescence
% spectroscopy and multi-way techniques. PARAFAC, Anal. Methods, (yr),
% DOI:10.1039/c3ay41160e.
% Appendix A contains the drEEM 0.1.0 tutorial
INSTRUCTIONS:
(1) Install the drEEM toolbox
(i) download the drEEM toolbox (drEEM_xxx.zip) from here: http://www.models.life.ku.dk/drEEM
(ii) copy the files to your computer, e.g. at C:/Program Files/MATLAB/extra_toolboxes/drEEM
(ii) in MATLAB, add drEEM to your MATLAB path like this:
Select [File] menu then click [Set path�] (in later versions of MATLAB, the Set Path icon is located in the environment tab).
Click [Add] and navigate to the drEEM folder you created in Step 1 above.
Click [Add] again and locate the N-way folder inside drEEM.
This associates the drEEM and N-way toolboxes with MATLAB so that their functions can be called from within MATLAB.
Click [Close] and [Save].
Steps (2) and (3) are needed for the EEM CORRECTION DEMO (Section 3) and PARAFAC DEMO (Section 4) of Appendix A in the reference above.
(2) Install the raw EEMs for the EEM correction demo
(i) download the demo subfolder (drEEM_demofiles.zip) from here: http://www.models.life.ku.dk/drEEM
(ii) unzip the files to the "/drEEM/demo" subfolder, e.g. at C:/Program Files/MATLAB/extra_toolboxes/drEEM/demo/
(3) Install the PARAFAC-ready (corrected) demonstration dataset
(i) download the dataset (drEEM_dataset.zip) from here: http://www.models.life.ku.dk/drEEM
(ii) unzip the files to the "Corrected_EEMs/Backup/" subfolder, e.g. at C:/Program Files/MATLAB/extra_toolboxes/drEEM/demo/Corrected_EEMs/Backup/
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